Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.166524	Ddx47	DEAD (Asp-Glu-Ala-Asp) box polypeptide 47	6		67755
Gene Ontology	ATP binding | helicase activity | hydrolase activity
Human Homolog	DDX47[DEAD (Asp-Glu-Ala-Asp) box polypeptide 47]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 66 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CTGCACCTCT 4.9 0.0049 P8 Cb GC GTCTACAGAG (15) 4.9 0.0049 P8 Cb GC GATGAAGCAG (5) 1.6 0.0016 P8 Cb GC TGGATGTAGT (5) 1.6 0.0016 Cb medulloblastoma ACCTCCTCAT (4) 2.3 0.0023 Cb medulloblastoma CTGCACCTCT 2.3 0.0023 Cb medulloblastoma GTCTACAGAG (15) 2.3 0.0023 Cb medulloblastoma TGGATGTAGT (5) 2.3 0.0023 P8 GC+1d culture CTGCACCTCT 3.4 0.0034 P8 GC+1d culture GTCTACAGAG (15) 3.4 0.0034 P8 GC+1d culture TGGATGTAGT (5) 3.4 0.0034 P8 GC+1d culture AACTGGCTGG (2) 1.1 0.0011 P8 GC+SHH+1d culture CTGCACCTCT 4.7 0.0047 P8 GC+SHH+1d culture GTCTACAGAG (15) 2.3 0.0023 P8 GC+SHH+1d culture TGGATGTAGT (5) 2.3 0.0023 P8 GC+SHH+1d culture AACTGGCTGG (2) 1.2 0.0012 P8 GC+SHH+1d culture GATGAAGCAG (5) 1.2 0.0012 3T3 fibroblasts CTGCACCTCT 14 0.014 3T3 fibroblasts GTCTACAGAG (15) 3.5 0.0035 E15 cortex CTGCACCTCT 19.8 0.0198 E15 cortex ACCTCCTCAT (4) 4.9 0.0049 E15 cortex CTGCACCTTT 4.9 0.0049 E15 cortex GATGAAGCAG (5) 4.9 0.0049 E15 cortex GTCTACAGAG (15) 4.9 0.0049 P1 cortex GTCTACAGAG (15) 13.6 0.0136 P1 cortex ACCTCCTCAT (4) 4.5 0.0045 Hypothalamus GATGAAGCAG (5) 3.6 0.0036 Hypothalamus CTGCACCTCT 1.8 0.0018 Hypothalamus GTCTACAGAG (15) 1.8 0.0018 Hypothalamus TGGATGTAGT (5) 1.8 0.0018 E12.5 retina CTGCACCTCT 3.8 0.0038 E12.5 retina GATGAAGCAG (5) 1.9 0.0019 E14.5 retina GTCTACAGAG (15) 7.3 0.0073 E14.5 retina ACCTCCTCAT (4) 1.8 0.0018 E16.5 retina GATGAAGCAG (5) 3.6 0.0036 E16.5 retina CTGCACCTCT 1.8 0.0018 E16.5 retina GTCTACAGAG (15) 1.8 0.0018 E18.5 retina CTGCACCTCT 5.5 0.0055 E18.5 retina GTCTACAGAG (15) 5.5 0.0055 E18.5 retina GATGAAGCAG (5) 1.8 0.0018 P0.5 retina CTGCACCTCT 3.9 0.0039 P0.5 retina GTCTACAGAG (15) 3.9 0.0039 P0.5 retina TGGATGTAGT (5) 3.9 0.0039 P0.5 retina CTGCACTTCT (5) 2 0.002 P2.5 retina CTGCACCTCT 3.5 0.0035 P2.5 retina AACTGGCTGG (2) 1.8 0.0018 P4.5 retina GTCTACAGAG (15) 7.9 0.0079 P4.5 retina CTGCACCTCT 2 0.002 P6.5 retina CTGCACCTCT 5 0.005 P6.5 retina GTCTACAGAG (15) 5 0.005 P6.5 retina CTGCACCTTT 1.7 0.0017 P6.5 retina CTGCACTTCT (5) 1.7 0.0017 P10.5 crx- retina CTGCACCTCT 7.4 0.0074 P10.5 crx- retina GTCTACAGAG (15) 3.7 0.0037 P10.5 crx- retina TGGATGTAGT (5) 1.9 0.0019 P10.5 crx+ retina GTCTACAGAG (15) 7.7 0.0077 P10.5 crx+ retina CTGCACCTCT 3.8 0.0038 P10.5 crx+ retina GACAGCTTTC 1.9 0.0019 Adult retinal GTCTACAGAG (15) 3.7 0.0037 Adult retinal CTGCACCTCT 1.9 0.0019 Adult retinal TGGATGTAGT (5) 1.9 0.0019 ONL GTCTACAGAG (15) 11.5 0.0115 ONL AACTGGCTGG (2) 3.8 0.0038 ONL GACAGCTTTC 3.8 0.0038 ONL CTGCACCTTT 1.9 0.0019 ONL CTGCACTTCT (5) 1.9 0.0019