Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.16660	P4hb	prolyl 4-hydroxylase, beta polypeptide	11	11 80.0 cM	18453
Gene Ontology	electron transport | electron transporter activity | endoplasmic reticulum | extracellular space | isomerase activity | peptidyl-proline hydroxylation to 4-hydroxy-L-proline | procollagen-proline 4-dioxygenase activity | procollagen-proline 4-dioxygenase activity | protein disulfide isomerase activity
Human Homolog	P4HB[procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), beta polypeptide (protein disulfide isomerase; thyroid hormone binding protein p55)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 66 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCCTGTGCCC (2) GCCTGTGGCC TGGCCTGAGT 14.7 0.0147 Cb medulloblastoma CTGGGCCGTG GCCTGTGGCC TGGCCTGAGT 34.7 0.0347 P8 GC+1d culture CTGGGCCGTG GCCTGTGGCC TGGCCTGAGT 34.2 0.0342 P8 GC+SHH+1d culture CTGGGCCGTG GAGGAAGACG GCCTGTGGCC TGGCCTGAGT 24.6 0.0246 3T3 fibroblasts CCCTGTGGCC (2) GAGGAAGACG GCCTGTGGCC 122.6 0.1226 E15 cortex CCCTGTGGCC (2) GCCTGTGGCC TGGCCTGAGT 39.5 0.0395 P1 cortex CTGGGCCGTG GCCTGTGGCC 18.1 0.0181 Hypothalamus CTGGGCCGTG GAGGAAGACG TGGCCTGAGT 21.8 0.0218 E12.5 retina CCCTGTGGCC (2) CTGGGCCGTG GCCTGTGGCC TGGCCTGAGT TTGAAATGGC 26.3 0.0263 E14.5 retina CTGGAAAAGA (2) GCCTGTGGCC 14.5 0.0145 E16.5 retina CCCTGTGCCC (2) CTGGGCCGTG GCCTGTGGCC TGGCCTGAGT TTGAAATGGC 41.6 0.0416 E18.5 retina CTGGAAAAGA (2) CTGGGCCGTG GCCTGTGGCC TGGCCTGAGT TTGAAATGGC 29.1 0.0291 P0.5 retina CCCTGTGGCC (2) GCCTGTGGCC TGGCCTGAGT 31.4 0.0314 P2.5 retina CTGGGCCGTG GAGGAAGACG GCCTGTGGCC TGGCCTGAGT TTGAAATGGC 35.2 0.0352 P4.5 retina GCCTGTGGCC TGGCCTGAGT 33.7 0.0337 P6.5 retina CTGGAAAAGA (2) CTGGGCCGTG GCCTGTGGCC TGGCCTGAGT 30 0.03 P10.5 crx- retina CCCTGTGCCC (2) GAGGAAGACG GCCTGTGGCC TGGCCTGAGT 24.2 0.0242 P10.5 crx+ retina GCCTGTGGCC TGGCCTGAGT 46.2 0.0462 Adult retinal CTGGGCCGTG GCCTGTGGCC TGGCCTGAGT 20.5 0.0205 ONL GCCTGTGGCC TGGCCTGAGT 11.5 0.0115