Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.16775	Rps24	ribosomal protein S24	16		20088
Gene Ontology	cytosolic small ribosomal subunit (sensu Eukarya) | intracellular | protein biosynthesis | ribosome | ribosome biogenesis | RNA binding | structural constituent of ribosome
Human Homolog	RPS24[ribosomal protein S24]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 224 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GCCTTTATGA (4) 171.3 0.1713 P8 Cb GC AGAGCGAAGT (5) 66.9 0.0669 P8 Cb GC TAAAAAAAAA (196) 47.3 0.0473 P8 Cb GC ATGGCTACGG 19.6 0.0196 P8 Cb GC GGGAAGCCAG (6) 13.1 0.0131 P8 Cb GC GCCTTTACGA (2) 6.5 0.0065 P8 Cb GC CAGAACAAGT (4) 3.3 0.0033 P8 Cb GC CCTTTATGAG 3.3 0.0033 P8 Cb GC TATGGCCTTT (3) 3.3 0.0033 P8 Cb GC ACCAACCGTC (3) 1.6 0.0016 P8 Cb GC AGTTACTTTT (5) 1.6 0.0016 P8 Cb GC GCGAAGGCCA (2) 1.6 0.0016 P8 Cb GC TCTTGGGGTC (2) 1.6 0.0016 P8 Cb GC TGTCCTTCTT (2) 1.6 0.0016 Cb medulloblastoma TAAAAAAAAA (196) 106.4 0.1064 Cb medulloblastoma GCCTTTATGA (4) 55.5 0.0555 Cb medulloblastoma AGAGCGAAGT (5) 32.4 0.0324 Cb medulloblastoma GGGAAGCCAG (6) 6.9 0.0069 Cb medulloblastoma ACCAACCGTC (3) 2.3 0.0023 Cb medulloblastoma ATGGCTACGG 2.3 0.0023 Cb medulloblastoma GCCTTTACGA (2) 2.3 0.0023 Cb medulloblastoma TCTTGGGGTC (2) 2.3 0.0023 P8 GC+1d culture GCCTTTATGA (4) 94.7 0.0947 P8 GC+1d culture TAAAAAAAAA (196) 66.2 0.0662 P8 GC+1d culture AGAGCGAAGT (5) 59.4 0.0594 P8 GC+1d culture ATGGCTACGG 10.3 0.0103 P8 GC+1d culture GGGAAGCCAG (6) 10.3 0.0103 P8 GC+1d culture GCCTTTACGA (2) 2.3 0.0023 P8 GC+1d culture AACTTCCTGT (3) 1.1 0.0011 P8 GC+1d culture AAGTGAGAGG (3) 1.1 0.0011 P8 GC+1d culture AGTGAACAAT (5) 1.1 0.0011 P8 GC+1d culture CCAAAGCCAG (2) 1.1 0.0011 P8 GC+1d culture TCTTGGGGTC (2) 1.1 0.0011 P8 GC+1d culture TGTCCTTCTT (2) 1.1 0.0011 P8 GC+SHH+1d culture GCCTTTATGA (4) 98.4 0.0984 P8 GC+SHH+1d culture TAAAAAAAAA (196) 93.7 0.0937 P8 GC+SHH+1d culture AGAGCGAAGT (5) 44.5 0.0445 P8 GC+SHH+1d culture GGGAAGCCAG (6) 10.5 0.0105 P8 GC+SHH+1d culture GCCTTTACGA (2) 9.4 0.0094 P8 GC+SHH+1d culture ATGGCTACGG 8.2 0.0082 P8 GC+SHH+1d culture TATGGCCTTT (3) 2.3 0.0023 P8 GC+SHH+1d culture AACTTCCTGT (3) 1.2 0.0012 P8 GC+SHH+1d culture ACTAGTGCTT (80) 1.2 0.0012 P8 GC+SHH+1d culture CAGAAGAAGT (3) 1.2 0.0012 P8 GC+SHH+1d culture CCAAAGCCAG (2) 1.2 0.0012 P8 GC+SHH+1d culture GCGGCGGTTC (3) 1.2 0.0012 P8 GC+SHH+1d culture GGCAAAGTGT (6) 1.2 0.0012 P8 GC+SHH+1d culture TCTTGCCAGT 1.2 0.0012 P8 GC+SHH+1d culture TCTTGGGGTC (2) 1.2 0.0012 P8 GC+SHH+1d culture TGTCCTTCTT (2) 1.2 0.0012 3T3 fibroblasts AGAGCGAAGT (5) 872.7 0.8727 3T3 fibroblasts GCCTTTATGA (4) 84.1 0.0841 3T3 fibroblasts ATGGCTACGG 24.5 0.0245 3T3 fibroblasts CCAAAGCCAG (2) 10.5 0.0105 3T3 fibroblasts GGGAAGCCAG (6) 10.5 0.0105 3T3 fibroblasts GTCATAGCTG (590) 10.5 0.0105 3T3 fibroblasts TAAAAAAAAA (196) 7 0.007 3T3 fibroblasts AACTTCCTGT (3) 3.5 0.0035 3T3 fibroblasts AGTGAACAAT (5) 3.5 0.0035 3T3 fibroblasts GCTGCTGCAG (8) 3.5 0.0035 E15 cortex AGAGCGAAGT (5) 202.9 0.2029 E15 cortex GCCTTTATGA (4) 59.4 0.0594 E15 cortex GGGAAGCCAG (6) 9.9 0.0099 E15 cortex TAAAAAAAAA (196) 9.9 0.0099 E15 cortex AACTTCCTGT (3) 4.9 0.0049 E15 cortex GCGGCGGTTC (3) 4.9 0.0049 E15 cortex GTCATAGCTG (590) 4.9 0.0049 E15 cortex TGTCCTTCTT (2) 4.9 0.0049 P1 cortex AGAGCGAAGT (5) 150 0.15 P1 cortex GCCTTTATGA (4) 54.5 0.0545 P1 cortex TAAAAAAAAA (196) 50 0.05 P1 cortex GGGAAGCCAG (6) 18.2 0.0182 P1 cortex CCTTTATGAG 13.6 0.0136 P1 cortex ATGGCTACGG 9.1 0.0091 P1 cortex AACTTCCTGT (3) 4.5 0.0045 Hypothalamus TAAAAAAAAA (196) 32.6 0.0326 Hypothalamus GCCTTTATGA (4) 25.4 0.0254 Hypothalamus AGAGCGAAGT (5) 14.5 0.0145 Hypothalamus GGGAAGCCAG (6) 3.6 0.0036 Hypothalamus AAGTGAGAGG (3) 1.8 0.0018 Hypothalamus TATGGCCTTT (3) 1.8 0.0018 Hypothalamus TCTTGCCAGT 1.8 0.0018 Hypothalamus TGGTAATCAG (2) 1.8 0.0018 Hypothalamus TGTCCTTCTT (2) 1.8 0.0018 Hypothalamus TTGGTGCTGG (6) 1.8 0.0018 E12.5 retina GCCTTTATGA (4) 232.8 0.2328 E12.5 retina AGAGCGAAGT (5) 97.6 0.0976 E12.5 retina TAAAAAAAAA (196) 24.4 0.0244 E12.5 retina GGGAAGCCAG (6) 9.4 0.0094 E12.5 retina ATGGCTACGG 5.6 0.0056 E12.5 retina CCTTTATGAG 5.6 0.0056 E12.5 retina GCCTTTACGA (2) 5.6 0.0056 E12.5 retina TATGGCCTTT (3) 3.8 0.0038 E12.5 retina TGGTAATCAG (2) 3.8 0.0038 E12.5 retina ACTAGTGCTT (80) 1.9 0.0019 E12.5 retina CAAGAACAGA (5) 1.9 0.0019 E12.5 retina CAGAAGAAGT (3) 1.9 0.0019 E14.5 retina GCCTTTATGA (4) 74.7 0.0747 E14.5 retina TAAAAAAAAA (196) 41.9 0.0419 E14.5 retina TGTCCTTCTT (2) 21.9 0.0219 E14.5 retina GGGAAGCCAG (6) 20 0.02 E14.5 retina CCAAAGCCAG (2) 7.3 0.0073 E14.5 retina ATGGCTACGG 5.5 0.0055 E14.5 retina TCTTGCCAGT 3.6 0.0036 E14.5 retina AGAGCGAAGT (5) 1.8 0.0018 E14.5 retina GCCTTTACGA (2) 1.8 0.0018 E14.5 retina GCTGCTGCAG (8) 1.8 0.0018 E14.5 retina TCTTGGGGTC (2) 1.8 0.0018 E14.5 retina TTGGTGCTGG (6) 1.8 0.0018 E16.5 retina GCCTTTATGA (4) 83.3 0.0833 E16.5 retina GGGAAGCCAG (6) 27.2 0.0272 E16.5 retina TAAAAAAAAA (196) 23.5 0.0235 E16.5 retina AGAGCGAAGT (5) 5.4 0.0054 E16.5 retina AGTTACTTTT (5) 3.6 0.0036 E16.5 retina CCAAAGCCAG (2) 3.6 0.0036 E16.5 retina GCCTTTACGA (2) 3.6 0.0036 E16.5 retina AACTTCCTGT (3) 1.8 0.0018 E16.5 retina AGTGAACAAT (5) 1.8 0.0018 E16.5 retina CAAGAACAGA (5) 1.8 0.0018 E16.5 retina GCGGCGGTTC (3) 1.8 0.0018 E16.5 retina GGCAAAGTGT (6) 1.8 0.0018 E16.5 retina TCTTGGGGTC (2) 1.8 0.0018 E16.5 retina TGTCCTTCTT (2) 1.8 0.0018 E16.5 retina TTGGTGCTGG (6) 1.8 0.0018 E18.5 retina TAAAAAAAAA (196) 107.3 0.1073 E18.5 retina GCCTTTATGA (4) 60 0.06 E18.5 retina AGAGCGAAGT (5) 23.6 0.0236 E18.5 retina GGGAAGCCAG (6) 10.9 0.0109 E18.5 retina ATGGCTACGG 5.5 0.0055 E18.5 retina TCTTGCCAGT 5.5 0.0055 E18.5 retina TGGTAATCAG (2) 3.6 0.0036 E18.5 retina GCCTTTACGA (2) 1.8 0.0018 E18.5 retina GGCAAAGTGT (6) 1.8 0.0018 E18.5 retina TGTCCTTCTT (2) 1.8 0.0018 P0.5 retina GCCTTTATGA (4) 160.9 0.1609 P0.5 retina AGAGCGAAGT (5) 80.5 0.0805 P0.5 retina TAAAAAAAAA (196) 37.3 0.0373 P0.5 retina ATGGCTACGG 13.7 0.0137 P0.5 retina GGGAAGCCAG (6) 7.9 0.0079 P0.5 retina ACCAACCGTC (3) 3.9 0.0039 P0.5 retina CCAAAGCCAG (2) 3.9 0.0039 P0.5 retina GTCATAGCTG (590) 3.9 0.0039 P0.5 retina AGTTACTTTT (5) 2 0.002 P0.5 retina CCTTTATGAG 2 0.002 P0.5 retina GCGAAGGCCA (2) 2 0.002 P0.5 retina TACTTCAGAT 2 0.002 P0.5 retina TGTCCTTCTT (2) 2 0.002 P2.5 retina TAAAAAAAAA (196) 72.2 0.0722 P2.5 retina GCCTTTATGA (4) 52.8 0.0528 P2.5 retina AGAGCGAAGT (5) 21.1 0.0211 P2.5 retina GGGAAGCCAG (6) 15.8 0.0158 P2.5 retina ATGGCTACGG 5.3 0.0053 P2.5 retina GCCTTTACGA (2) 5.3 0.0053 P2.5 retina AGTTACTTTT (5) 1.8 0.0018 P2.5 retina GCGAAGGCCA (2) 1.8 0.0018 P2.5 retina GTCATAGCTG (590) 1.8 0.0018 P2.5 retina TTGGTGCTGG (6) 1.8 0.0018 P4.5 retina TAAAAAAAAA (196) 122.8 0.1228 P4.5 retina GCCTTTATGA (4) 49.5 0.0495 P4.5 retina AGAGCGAAGT (5) 25.8 0.0258 P4.5 retina GGGAAGCCAG (6) 11.9 0.0119 P4.5 retina ATGGCTACGG 4 0.004 P4.5 retina GCCTTTACGA (2) 4 0.004 P4.5 retina AACTTCCTGT (3) 2 0.002 P4.5 retina ACTAGTGCTT (80) 2 0.002 P4.5 retina CAAGAACAGA (5) 2 0.002 P4.5 retina GTCATAGCTG (590) 2 0.002 P4.5 retina TGGTAATCAG (2) 2 0.002 P4.5 retina TTGGTGCTGG (6) 2 0.002 P6.5 retina TAAAAAAAAA (196) 63.4 0.0634 P6.5 retina GCCTTTATGA (4) 61.7 0.0617 P6.5 retina AGAGCGAAGT (5) 28.3 0.0283 P6.5 retina GGGAAGCCAG (6) 15 0.015 P6.5 retina ATGGCTACGG 6.7 0.0067 P6.5 retina GTCATAGCTG (590) 3.3 0.0033 P6.5 retina GCCTTTACGA (2) 1.7 0.0017 P6.5 retina TACTTCAGAT 1.7 0.0017 P6.5 retina TGGTAATCAG (2) 1.7 0.0017 P6.5 retina TTGGTGCTGG (6) 1.7 0.0017 P10.5 crx- retina GCCTTTATGA (4) 163.5 0.1635 P10.5 crx- retina AGAGCGAAGT (5) 26 0.026 P10.5 crx- retina GCCTTTACGA (2) 14.9 0.0149 P10.5 crx- retina GGGAAGCCAG (6) 14.9 0.0149 P10.5 crx- retina TAAAAAAAAA (196) 9.3 0.0093 P10.5 crx- retina CCAAAGCCAG (2) 7.4 0.0074 P10.5 crx- retina AACTTCCTGT (3) 5.6 0.0056 P10.5 crx- retina AAGTGAGAGG (3) 3.7 0.0037 P10.5 crx- retina TACTTCAGAT 3.7 0.0037 P10.5 crx- retina TATGGCCTTT (3) 3.7 0.0037 P10.5 crx- retina ACCAACCGTC (3) 1.9 0.0019 P10.5 crx- retina AGTTACTTTT (5) 1.9 0.0019 P10.5 crx+ retina AGAGCGAAGT (5) 65.4 0.0654 P10.5 crx+ retina GCCTTTATGA (4) 44.2 0.0442 P10.5 crx+ retina TAAAAAAAAA (196) 25 0.025 P10.5 crx+ retina GGGAAGCCAG (6) 19.2 0.0192 P10.5 crx+ retina GCCTTTACGA (2) 9.6 0.0096 P10.5 crx+ retina AAGTGAGAGG (3) 1.9 0.0019 P10.5 crx+ retina AGTTACTTTT (5) 1.9 0.0019 P10.5 crx+ retina ATGGCTACGG 1.9 0.0019 P10.5 crx+ retina CAGAAGAAGT (3) 1.9 0.0019 P10.5 crx+ retina TACTTCAGAT 1.9 0.0019 P10.5 crx+ retina TATGGCCTTT (3) 1.9 0.0019 Adult retinal AGAGCGAAGT (5) 38.9 0.0389 Adult retinal GCCTTTATGA (4) 35.2 0.0352 Adult retinal TATGGCCTTT (3) 20.4 0.0204 Adult retinal TAAAAAAAAA (196) 18.5 0.0185 Adult retinal ATGAACACTG (30) 11.1 0.0111 Adult retinal GGGAAGCCAG (6) 11.1 0.0111 Adult retinal AACTTCCTGT (3) 1.9 0.0019 Adult retinal GCCTTTACGA (2) 1.9 0.0019 Adult retinal GCGAAGGCCA (2) 1.9 0.0019 Adult retinal GCTGCTGCAG (8) 1.9 0.0019 Adult retinal GTCATAGCTG (590) 1.9 0.0019 ONL AGAGCGAAGT (5) 61.3 0.0613 ONL GCCTTTATGA (4) 57.5 0.0575 ONL TAAAAAAAAA (196) 28.7 0.0287 ONL ATGAACACTG (30) 13.4 0.0134 ONL TATGGCCTTT (3) 9.6 0.0096 ONL GTCATAGCTG (590) 5.7 0.0057 ONL GGGAAGCCAG (6) 3.8 0.0038 ONL TTGGTGCTGG (6) 3.8 0.0038 ONL AGTTACTTTT (5) 1.9 0.0019 ONL GCTGCTGCAG (8) 1.9 0.0019 ONL TCTTGCCAGT 1.9 0.0019