Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.169059	Zfp398	zinc finger protein 398	6		272347
Gene Ontology	intracellular | nucleic acid binding | regulation of transcription, DNA-dependent
Human Homolog	ZNF398[zinc finger protein 398]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 52 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGGATGCTGG (15) 13.1 0.0131 P8 Cb GC CCTTTATTCC (18) 3.3 0.0033 P8 Cb GC CCTGGTGCCT (7) 1.6 0.0016 P8 Cb GC TTACATTCCA 1.6 0.0016 Cb medulloblastoma TGGATGCTGG (15) 4.6 0.0046 Cb medulloblastoma ATATGGAGGG 2.3 0.0023 Cb medulloblastoma GCCTAAAAAA (7) 2.3 0.0023 P8 GC+1d culture TGGATGCTGG (15) 8 0.008 P8 GC+1d culture CCTTTATTCC (18) 6.8 0.0068 P8 GC+1d culture ATATGGAGGG 2.3 0.0023 P8 GC+1d culture TTACATTCCA 1.1 0.0011 P8 GC+SHH+1d culture TGGATGCTGG (15) 2.3 0.0023 P8 GC+SHH+1d culture CCTTTATTCC (18) 1.2 0.0012 3T3 fibroblasts TGGATGCTGG (15) 3.5 0.0035 E15 cortex TGGATGCTGG (15) 14.8 0.0148 E15 cortex CCTGGTGCCT (7) 4.9 0.0049 P1 cortex CCTTTATTCC (18) 27.3 0.0273 Hypothalamus TGGATGCTGG (15) 5.4 0.0054 E12.5 retina CCTTTATTCC (18) 5.6 0.0056 E12.5 retina TGGATGCTGG (15) 5.6 0.0056 E12.5 retina GCCTAAAAAA (7) 1.9 0.0019 E14.5 retina TGGATGCTGG (15) 18.2 0.0182 E14.5 retina CCTTTATTCC (18) 12.8 0.0128 E14.5 retina TTACATTCCA 3.6 0.0036 E14.5 retina CCTGGTGCCT (7) 1.8 0.0018 E16.5 retina TGGATGCTGG (15) 30.8 0.0308 E16.5 retina CCTTTATTCC (18) 3.6 0.0036 E16.5 retina TTACATTCCA 1.8 0.0018 E18.5 retina CCTTTATTCC (18) 7.3 0.0073 E18.5 retina GCCTAAAAAA (7) 3.6 0.0036 E18.5 retina TGGATGCTGG (15) 1.8 0.0018 P0.5 retina TGGATGCTGG (15) 7.9 0.0079 P0.5 retina CCTTTATTCC (18) 2 0.002 P2.5 retina TGGATGCTGG (15) 15.8 0.0158 P2.5 retina CCTTTATTCC (18) 3.5 0.0035 P2.5 retina TTACATTCCA 1.8 0.0018 P4.5 retina CCTTTATTCC (18) 7.9 0.0079 P4.5 retina TGGATGCTGG (15) 5.9 0.0059 P6.5 retina TGGATGCTGG (15) 6.7 0.0067 P6.5 retina CCTTTATTCC (18) 5 0.005 P10.5 crx- retina TGGATGCTGG (15) 5.6 0.0056 P10.5 crx- retina CCTTTATTCC (18) 3.7 0.0037 P10.5 crx- retina TTACATTCCA 1.9 0.0019 P10.5 crx+ retina CCTTTATTCC (18) 7.7 0.0077 P10.5 crx+ retina TGGATGCTGG (15) 5.8 0.0058 P10.5 crx+ retina CCTGGTGCCT (7) 3.8 0.0038 P10.5 crx+ retina TTACATTCCA 1.9 0.0019 Adult retinal TGGATGCTGG (15) 5.6 0.0056 Adult retinal CCTGGTGCCT (7) 3.7 0.0037 Adult retinal TTACATTCCA 3.7 0.0037 Adult retinal CCTTTATTCC (18) 1.9 0.0019 ONL CCTTTATTCC (18) 1.9 0.0019