Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.170461	Arhgef18	rho/rac guanine nucleotide exchange factor (GEF) 18	8		102098
Gene Ontology	actin cytoskeleton organization and biogenesis | cellular_component unknown | guanyl-nucleotide exchange factor activity | regulation of cell shape | small GTPase mediated signal transduction
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 52 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GCTGCTGGTG (9) 13.1 0.0131 P8 Cb GC ATCTTCGCCT 1.6 0.0016 P8 Cb GC GGGTTCCCCT (8) 1.6 0.0016 P8 Cb GC GTGTCTGGTG (3) 1.6 0.0016 Cb medulloblastoma GCTGCTGGTG (9) 23.1 0.0231 Cb medulloblastoma ATCTTCGCCT 4.6 0.0046 Cb medulloblastoma GTGTCTGGTG (3) 4.6 0.0046 Cb medulloblastoma GGGTTCCCCT (8) 2.3 0.0023 P8 GC+1d culture GCTGCTGGTG (9) 16 0.016 P8 GC+1d culture GTGTCTGGTG (3) 1.1 0.0011 P8 GC+SHH+1d culture GCTGCTGGTG (9) 8.2 0.0082 P8 GC+SHH+1d culture ATCTTCGCCT 1.2 0.0012 3T3 fibroblasts GGGTTCCCCT (8) 28 0.028 3T3 fibroblasts GCTGCTGGTG (9) 3.5 0.0035 E15 cortex GCTGCTGGTG (9) 14.8 0.0148 E15 cortex GGTCCCTTCC (8) 4.9 0.0049 P1 cortex GCTGCTGGTG (9) 13.6 0.0136 P1 cortex ATCTTCGCCT 4.5 0.0045 Hypothalamus GCTGCTGGTG (9) 18.1 0.0181 Hypothalamus ATCTTCGCCT 3.6 0.0036 Hypothalamus GTGTCTGGTG (3) 1.8 0.0018 E12.5 retina GCTGCTGGTG (9) 5.6 0.0056 E12.5 retina ATCTTCGCCT 1.9 0.0019 E14.5 retina GCTGCTGGTG (9) 14.6 0.0146 E14.5 retina ATCTTCGCCT 1.8 0.0018 E14.5 retina GGGTTCCCCT (8) 1.8 0.0018 E14.5 retina GTGTCTGGTG (3) 1.8 0.0018 E16.5 retina GCTGCTGGTG (9) 12.7 0.0127 E16.5 retina ATCTTCGCCT 5.4 0.0054 E16.5 retina GGGTTCCCCT (8) 1.8 0.0018 E16.5 retina GGTCCCTTCC (8) 1.8 0.0018 E18.5 retina GCTGCTGGTG (9) 34.6 0.0346 E18.5 retina ATCTTCGCCT 1.8 0.0018 P0.5 retina GCTGCTGGTG (9) 5.9 0.0059 P0.5 retina GTGTCTGGTG (3) 2 0.002 P2.5 retina GCTGCTGGTG (9) 17.6 0.0176 P2.5 retina GGGTTCCCCT (8) 7 0.007 P2.5 retina ATCTTCGCCT 5.3 0.0053 P4.5 retina GCTGCTGGTG (9) 19.8 0.0198 P6.5 retina GCTGCTGGTG (9) 15 0.015 P6.5 retina GGGTTCCCCT (8) 5 0.005 P6.5 retina GGTCCCTTCC (8) 3.3 0.0033 P6.5 retina GTGTCTGGTG (3) 1.7 0.0017 P10.5 crx- retina GGGTTCCCCT (8) 7.4 0.0074 P10.5 crx- retina ATCTTCGCCT 3.7 0.0037 P10.5 crx- retina GCTGCTGGTG (9) 3.7 0.0037 P10.5 crx- retina GTGTCTGGTG (3) 1.9 0.0019 P10.5 crx+ retina GCTGCTGGTG (9) 28.8 0.0288 P10.5 crx+ retina ATCTTCGCCT 1.9 0.0019 Adult retinal GCTGCTGGTG (9) 11.1 0.0111 ONL GCTGCTGGTG (9) 13.4 0.0134 ONL ATCTTCGCCT 3.8 0.0038