Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.170905
Fyb
FYN binding protein
15
23880
Mm.170905
B630013F22Rik
RIKEN cDNA B630013F22 gene
15
320185
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 104 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TGTGTGTGTG (
115
)
27.7
0.0277
P8 Cb GC
ATTGGCTTAA
(
3
)
13.1
0.0131
P8 Cb GC
GGGAGGACTA (
4
)
1.6
0.0016
P8 Cb GC
TACAGCACAG (
5
)
1.6
0.0016
Cb medulloblastoma
TGTGTGTGTG (
115
)
30.1
0.0301
Cb medulloblastoma
GCTGTTAGGG (
5
)
11.6
0.0116
Cb medulloblastoma
ATTGGCTTAA
(
3
)
9.2
0.0092
Cb medulloblastoma
TACAGCACAG (
5
)
6.9
0.0069
P8 GC+1d culture
TGTGTGTGTG (
115
)
27.4
0.0274
P8 GC+1d culture
ATTGGCTTAA
(
3
)
5.7
0.0057
P8 GC+1d culture
TACAGCACAG (
5
)
4.6
0.0046
P8 GC+1d culture
CTTTCTGCTC (
8
)
1.1
0.0011
P8 GC+1d culture
GTCCTGGGGG
(
7
)
1.1
0.0011
P8 GC+SHH+1d culture
TGTGTGTGTG (
115
)
28.1
0.0281
P8 GC+SHH+1d culture
ATTGGCTTAA
(
3
)
11.7
0.0117
P8 GC+SHH+1d culture
TGGAGGTCAG
(
7
)
3.5
0.0035
P8 GC+SHH+1d culture
TACAGCACAG (
5
)
2.3
0.0023
P8 GC+SHH+1d culture
CTTTCTGCTC (
8
)
1.2
0.0012
P8 GC+SHH+1d culture
GCTGCCAAGA (
7
)
1.2
0.0012
P8 GC+SHH+1d culture
GGGAGGACTA (
4
)
1.2
0.0012
3T3 fibroblasts
CCAGCTTCCT (
5
)
28
0.028
3T3 fibroblasts
TGTGTGTGTG (
115
)
28
0.028
3T3 fibroblasts
GTCCTGGGGG
(
7
)
7
0.007
3T3 fibroblasts
TGGAGGTCAG
(
7
)
7
0.007
3T3 fibroblasts
GATTGGCAGG (
3
)
3.5
0.0035
3T3 fibroblasts
TACAGCACAG (
5
)
3.5
0.0035
E15 cortex
GTCCTGGGGG
(
7
)
19.8
0.0198
E15 cortex
CTTTCTGCTC (
8
)
4.9
0.0049
E15 cortex
GATTGGCAGG (
3
)
4.9
0.0049
E15 cortex
TACAGCACAG (
5
)
4.9
0.0049
P1 cortex
TGTGTGTGTG (
115
)
18.2
0.0182
P1 cortex
ATTGGCTTAA
(
3
)
4.5
0.0045
P1 cortex
CTTTCTGCTC (
8
)
4.5
0.0045
P1 cortex
GATTGGCAGG (
3
)
4.5
0.0045
P1 cortex
TACAGCACAG (
5
)
4.5
0.0045
Hypothalamus
TGTGTGTGTG (
115
)
25.4
0.0254
Hypothalamus
GCTGTTAGGG (
5
)
7.2
0.0072
Hypothalamus
ATTGGCTTAA
(
3
)
5.4
0.0054
Hypothalamus
TACAGCACAG (
5
)
3.6
0.0036
Hypothalamus
TGGAGGTCAG
(
7
)
3.6
0.0036
Hypothalamus
CTTTCTGCTC (
8
)
1.8
0.0018
Hypothalamus
GGGAGGACTA (
4
)
1.8
0.0018
E12.5 retina
TGTGTGTGTG (
115
)
43.2
0.0432
E12.5 retina
ATTGGCTTAA
(
3
)
11.3
0.0113
E14.5 retina
TGTGTGTGTG (
115
)
54.7
0.0547
E14.5 retina
ATTGGCTTAA
(
3
)
12.8
0.0128
E14.5 retina
GATTGGCAGG (
3
)
9.1
0.0091
E16.5 retina
TGTGTGTGTG (
115
)
39.8
0.0398
E16.5 retina
ATTGGCTTAA
(
3
)
5.4
0.0054
E16.5 retina
CTTTCTGCTC (
8
)
3.6
0.0036
E16.5 retina
CAAAAAACCT (
2
)
1.8
0.0018
E18.5 retina
TGTGTGTGTG (
115
)
47.3
0.0473
E18.5 retina
GTCCTGGGGG
(
7
)
5.5
0.0055
E18.5 retina
ATTGGCTTAA
(
3
)
3.6
0.0036
E18.5 retina
CTTTCTGCTC (
8
)
1.8
0.0018
E18.5 retina
GATTGGCAGG (
3
)
1.8
0.0018
E18.5 retina
GGGAGGACTA (
4
)
1.8
0.0018
P0.5 retina
TGTGTGTGTG (
115
)
21.6
0.0216
P0.5 retina
ATTGGCTTAA
(
3
)
3.9
0.0039
P0.5 retina
GTCCTGGGGG
(
7
)
3.9
0.0039
P0.5 retina
CAAAAAACCT (
2
)
2
0.002
P0.5 retina
GCTGCCAAGA (
7
)
2
0.002
P0.5 retina
TGGAGGTCAG
(
7
)
2
0.002
P2.5 retina
TGTGTGTGTG (
115
)
35.2
0.0352
P2.5 retina
ATTGGCTTAA
(
3
)
3.5
0.0035
P2.5 retina
CTTTCTGCTC (
8
)
3.5
0.0035
P2.5 retina
GTCCTGGGGG
(
7
)
3.5
0.0035
P2.5 retina
CAAAAAACCT (
2
)
1.8
0.0018
P2.5 retina
GATTGGCAGG (
3
)
1.8
0.0018
P2.5 retina
GCTGTTAGGG (
5
)
1.8
0.0018
P4.5 retina
TGTGTGTGTG (
115
)
47.6
0.0476
P4.5 retina
CTTTCTGCTC (
8
)
4
0.004
P4.5 retina
ATTGGCTTAA
(
3
)
2
0.002
P4.5 retina
GCTGCCAAGA (
7
)
2
0.002
P4.5 retina
GGGAGGACTA (
4
)
2
0.002
P4.5 retina
TACAGCACAG (
5
)
2
0.002
P6.5 retina
TGTGTGTGTG (
115
)
41.7
0.0417
P6.5 retina
ATTGGCTTAA
(
3
)
3.3
0.0033
P6.5 retina
TACAGCACAG (
5
)
3.3
0.0033
P6.5 retina
CTTTCTGCTC (
8
)
1.7
0.0017
P6.5 retina
GATTGGCAGG (
3
)
1.7
0.0017
P6.5 retina
GTCCTGGGGG
(
7
)
1.7
0.0017
P6.5 retina
TGGAGGTCAG
(
7
)
1.7
0.0017
P10.5 crx- retina
TGTGTGTGTG (
115
)
59.4
0.0594
P10.5 crx- retina
ATTGGCTTAA
(
3
)
14.9
0.0149
P10.5 crx- retina
GCTGTTAGGG (
5
)
3.7
0.0037
P10.5 crx- retina
TACAGCACAG (
5
)
3.7
0.0037
P10.5 crx- retina
CCAGCTTCCT (
5
)
1.9
0.0019
P10.5 crx- retina
CTTTCTGCTC (
8
)
1.9
0.0019
P10.5 crx+ retina
TGTGTGTGTG (
115
)
44.2
0.0442
P10.5 crx+ retina
ATTGGCTTAA
(
3
)
7.7
0.0077
P10.5 crx+ retina
GCTGTTAGGG (
5
)
5.8
0.0058
P10.5 crx+ retina
TGGAGGTCAG
(
7
)
5.8
0.0058
P10.5 crx+ retina
GTCCTGGGGG
(
7
)
1.9
0.0019
P10.5 crx+ retina
TACAGCACAG (
5
)
1.9
0.0019
Adult retinal
TGTGTGTGTG (
115
)
53.7
0.0537
Adult retinal
GCTGTTAGGG (
5
)
9.3
0.0093
Adult retinal
GATTGGCAGG (
3
)
1.9
0.0019
Adult retinal
TGGAGGTCAG
(
7
)
1.9
0.0019
ONL
TGTGTGTGTG (
115
)
23
0.023
ONL
GATTGGCAGG (
3
)
21.1
0.0211
ONL
TGGAGGTCAG
(
7
)
5.7
0.0057
ONL
GCTGTTAGGG (
5
)
3.8
0.0038
ONL
ATTGGCTTAA
(
3
)
1.9
0.0019
