Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.171399
Sdccag8
serologically defined colon cancer antigen 8
1
76816
Mm.171399
Hmga2-ps1
high mobility group AT-hook 2, pseudogene 1
1
15365
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 51 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CTGGGTAACT
(
2
)
9.8
0.0098
P8 Cb GC
GGCTGCCCCT (
4
)
1.6
0.0016
Cb medulloblastoma
CTGGGTAACT
(
2
)
6.9
0.0069
P8 GC+1d culture
CTGGGTAACT
(
2
)
14.8
0.0148
P8 GC+1d culture
GATTAATAAA
(
4
)
2.3
0.0023
P8 GC+1d culture
ACCATCTCAG
(
2
)
1.1
0.0011
P8 GC+1d culture
CCACAATCTG
(
4
)
1.1
0.0011
P8 GC+1d culture
CTGGGCAAGT (
8
)
1.1
0.0011
P8 GC+SHH+1d culture
CTGGGTAACT
(
2
)
25.8
0.0258
P8 GC+SHH+1d culture
GATTAATAAA
(
4
)
1.2
0.0012
P8 GC+SHH+1d culture
GGATTTAATT (
5
)
1.2
0.0012
3T3 fibroblasts
CTGGGTAACT
(
2
)
14
0.014
E15 cortex
CTGGGTAACT
(
2
)
14.8
0.0148
E15 cortex
AAATGTAAAG
(
4
)
4.9
0.0049
P1 cortex
CTGGGTAACT
(
2
)
4.5
0.0045
Hypothalamus
CTGGGTAACT
(
2
)
3.6
0.0036
Hypothalamus
ACCATCTCAG
(
2
)
1.8
0.0018
Hypothalamus
CTGGGCAAGT (
8
)
1.8
0.0018
Hypothalamus
GGCTGCCCCT (
4
)
1.8
0.0018
E12.5 retina
AAATGTAAAG
(
4
)
5.6
0.0056
E12.5 retina
CTGGGTAACT
(
2
)
3.8
0.0038
E12.5 retina
CTGGGCAAGT (
8
)
1.9
0.0019
E12.5 retina
GATTAATAAA
(
4
)
1.9
0.0019
E14.5 retina
CTGGGTAACT
(
2
)
3.6
0.0036
E16.5 retina
CTGGGTAACT
(
2
)
12.7
0.0127
E16.5 retina
GATTAATAAA
(
4
)
5.4
0.0054
E16.5 retina
CTGGGCAAGT (
8
)
3.6
0.0036
E16.5 retina
GGATTTAATT (
5
)
1.8
0.0018
E18.5 retina
CTGGGTAACT
(
2
)
10.9
0.0109
E18.5 retina
GATTAATAAA
(
4
)
5.5
0.0055
E18.5 retina
AAATGTAAAG
(
4
)
1.8
0.0018
P0.5 retina
GGCTGCCCCT (
4
)
2
0.002
P2.5 retina
CTGGGTAACT
(
2
)
7
0.007
P4.5 retina
CTGGGTAACT
(
2
)
13.9
0.0139
P4.5 retina
GATTAATAAA
(
4
)
9.9
0.0099
P4.5 retina
ACCATCTCAG
(
2
)
2
0.002
P6.5 retina
CTGGGTAACT
(
2
)
8.3
0.0083
P6.5 retina
GATTAATAAA
(
4
)
3.3
0.0033
P6.5 retina
AAATGTAAAG
(
4
)
1.7
0.0017
P10.5 crx- retina
CTGGGTAACT
(
2
)
9.3
0.0093
P10.5 crx- retina
CCACAATCTG
(
4
)
3.7
0.0037
P10.5 crx- retina
CTGGGCAAGT (
8
)
1.9
0.0019
P10.5 crx+ retina
CTGGGTAACT
(
2
)
11.5
0.0115
P10.5 crx+ retina
AAATGTAAAG
(
4
)
1.9
0.0019
Adult retinal
AAATGTAAAG
(
4
)
1.9
0.0019
Adult retinal
CTGGGCAAGT (
8
)
1.9
0.0019
Adult retinal
CTGGGTAACT
(
2
)
1.9
0.0019
Adult retinal
GATTAATAAA
(
4
)
1.9
0.0019
Adult retinal
GGATTTAATT (
5
)
1.9
0.0019
ONL
CTGGGTAACT
(
2
)
9.6
0.0096
ONL
AAATGTAAAG
(
4
)
1.9
0.0019
