Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.171615	Tcf12	transcription factor 12	9	9 D (9 42.0 cM)	21406
Mm.171615	5830443J22Rik	RIKEN cDNA 5830443J22 gene	9		76056
Mm.171615	E430034C17Rik	RIKEN cDNA E430034C17 gene	9		320754
Mm.171615	A130037E08Rik	RIKEN cDNA A130037E08 gene	9		319985
Mm.171615	A430027C01Rik	RIKEN cDNA A430027C01 gene	9		97545
Mm.171615	2810043O03Rik	RIKEN cDNA 2810043O03 gene	9		72697
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 6 In Situ Hybridization Images

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SAGE Tags

Total 34 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCTTTAATCC (355) 52.2 0.0522 P8 Cb GC TAGTTCCTAT (6) 14.7 0.0147 P8 Cb GC GAAGTTTAAA (8) 1.6 0.0016 Cb medulloblastoma CCTTTAATCC (355) 41.6 0.0416 P8 GC+1d culture CCTTTAATCC (355) 32 0.032 P8 GC+1d culture TAGTTCCTAT (6) 6.8 0.0068 P8 GC+SHH+1d culture CCTTTAATCC (355) 25.8 0.0258 P8 GC+SHH+1d culture TAGTTCCTAT (6) 10.5 0.0105 3T3 fibroblasts CCTTTAATCC (355) 70.1 0.0701 E15 cortex CCTTTAATCC (355) 54.4 0.0544 P1 cortex CCTTTAATCC (355) 154.5 0.1545 Hypothalamus CCTTTAATCC (355) 19.9 0.0199 E12.5 retina CCTTTAATCC (355) 75.1 0.0751 E12.5 retina TAGTTCCTAT (6) 9.4 0.0094 E14.5 retina CCTTTAATCC (355) 120.3 0.1203 E14.5 retina TAGTTCCTAT (6) 3.6 0.0036 E16.5 retina CCTTTAATCC (355) 68.8 0.0688 E16.5 retina TAGTTCCTAT (6) 14.5 0.0145 E18.5 retina CCTTTAATCC (355) 23.6 0.0236 P0.5 retina CCTTTAATCC (355) 72.6 0.0726 P0.5 retina TAGTTCCTAT (6) 3.9 0.0039 P2.5 retina CCTTTAATCC (355) 70.4 0.0704 P2.5 retina TAGTTCCTAT (6) 3.5 0.0035 P4.5 retina CCTTTAATCC (355) 43.6 0.0436 P4.5 retina TAGTTCCTAT (6) 5.9 0.0059 P6.5 retina CCTTTAATCC (355) 70 0.07 P6.5 retina TAGTTCCTAT (6) 8.3 0.0083 P10.5 crx- retina CCTTTAATCC (355) 63.2 0.0632 P10.5 crx- retina TAGTTCCTAT (6) 5.6 0.0056 P10.5 crx- retina GAAGTTTAAA (8) 1.9 0.0019 P10.5 crx+ retina CCTTTAATCC (355) 38.4 0.0384 P10.5 crx+ retina TAGTTCCTAT (6) 3.8 0.0038 Adult retinal CCTTTAATCC (355) 129.6 0.1296 ONL CCTTTAATCC (355) 84.3 0.0843