Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.17185	Lgmn	legumain	12		19141
Gene Ontology	apical part of cell | cysteine-type endopeptidase activity | cysteine-type peptidase activity | hydrolase activity | late endosome | legumain activity | lysosome | negative regulation of body size | proteolysis and peptidolysis
Human Homolog	LGMN[legumain]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 30 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TCTTCATTTA (3) 1.6 0.0016 Cb medulloblastoma AAAGTGATGC 2.3 0.0023 Cb medulloblastoma GACAAAGTGT (2) 2.3 0.0023 P8 GC+1d culture TCTTCATTTA (3) 2.3 0.0023 P8 GC+SHH+1d culture GACAAAGTGT (2) 5.9 0.0059 P8 GC+SHH+1d culture TCTTCATTTA (3) 1.2 0.0012 3T3 fibroblasts GACAAAGTGT (2) 3.5 0.0035 3T3 fibroblasts TCTTCATTTA (3) 3.5 0.0035 P1 cortex TCTTCATTTA (3) 27.3 0.0273 Hypothalamus AAAGTGATGC 1.8 0.0018 E12.5 retina GACAAAGTGT (2) 1.9 0.0019 E12.5 retina TCTTCATTTA (3) 1.9 0.0019 E14.5 retina TCTTCATTTA (3) 3.6 0.0036 P0.5 retina GACAAAGTGT (2) 7.9 0.0079 P0.5 retina GCACAACTCA 2 0.002 P0.5 retina TCTTCATTTA (3) 2 0.002 P2.5 retina TCTTCATTTA (3) 5.3 0.0053 P4.5 retina TCTTCATTTA (3) 5.9 0.0059 P4.5 retina GACAAAGTGT (2) 2 0.002 P4.5 retina GCACAACTCA 2 0.002 P6.5 retina GACAAAGTGT (2) 3.3 0.0033 P10.5 crx- retina GACAAAGTGT (2) 11.1 0.0111 P10.5 crx- retina AAAGTGATGC 1.9 0.0019 P10.5 crx+ retina GACAAAGTGT (2) 3.8 0.0038 P10.5 crx+ retina GCACAACTCA 1.9 0.0019 P10.5 crx+ retina TCTTCATTTA (3) 1.9 0.0019 Adult retinal GACAAAGTGT (2) 5.6 0.0056 ONL GACAAAGTGT (2) 1.9 0.0019 ONL GCACAACTCA 1.9 0.0019 ONL TCTTCATTTA (3) 1.9 0.0019