Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.172	Lox	lysyl oxidase	18	18 29.0 cM	16948
Gene Ontology	copper ion binding | extracellular space | oxidoreductase activity | protein-lysine 6-oxidase activity
Human Homolog	LOX[lysyl oxidase]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 38 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  Cb medulloblastoma TATATTAAAA (7) 4.6 0.0046 Cb medulloblastoma CTTTTAAAAA (10) 2.3 0.0023 Cb medulloblastoma GCTTTTTAAA (7) 2.3 0.0023 P8 GC+1d culture CTTTTAAAAA (10) 4.6 0.0046 P8 GC+1d culture GGAATGGTCT (3) 3.4 0.0034 P8 GC+1d culture TTATTTTGTG (5) 1.1 0.0011 P8 GC+SHH+1d culture CTTTTAAAAA (10) 4.7 0.0047 P8 GC+SHH+1d culture TCATTTGGTG (2) 3.5 0.0035 P8 GC+SHH+1d culture GCTTTTTAAA (7) 1.2 0.0012 P8 GC+SHH+1d culture GGAATGGTCT (3) 1.2 0.0012 3T3 fibroblasts TCATTTGGTG (2) 28 0.028 3T3 fibroblasts CCCTGCAGCA (3) 14 0.014 E15 cortex CTTTTAAAAA (10) 4.9 0.0049 P1 cortex GGAATGGTCT (3) 13.6 0.0136 Hypothalamus TATATTAAAA (7) 9.1 0.0091 Hypothalamus CTTTTAAAAA (10) 1.8 0.0018 Hypothalamus GCTTTTTAAA (7) 1.8 0.0018 E12.5 retina CTTTTAAAAA (10) 3.8 0.0038 E14.5 retina TATGTTTTTC (5) 14.6 0.0146 E14.5 retina CTTTTAAAAA (10) 7.3 0.0073 E16.5 retina CTTTTAAAAA (10) 3.6 0.0036 E18.5 retina CTTTTAAAAA (10) 5.5 0.0055 E18.5 retina TATATTAAAA (7) 3.6 0.0036 P0.5 retina GGAATGGTCT (3) 3.9 0.0039 P2.5 retina CTTTTAAAAA (10) 7 0.007 P4.5 retina CTTTTAAAAA (10) 5.9 0.0059 P4.5 retina CCCTGCAGCA (3) 2 0.002 P6.5 retina CTTTTAAAAA (10) 6.7 0.0067 P6.5 retina GGAATGGTCT (3) 1.7 0.0017 P6.5 retina TATATTAAAA (7) 1.7 0.0017 P10.5 crx- retina CTTTTAAAAA (10) 1.9 0.0019 P10.5 crx- retina GGAATGGTCT (3) 1.9 0.0019 P10.5 crx- retina TTATTTTGTG (5) 1.9 0.0019 P10.5 crx+ retina CTTTTAAAAA (10) 1.9 0.0019 Adult retinal TATATTAAAA (7) 1.9 0.0019 ONL TATGTTTTTC (5) 5.7 0.0057 ONL CTTTTAAAAA (10) 1.9 0.0019 ONL GCTTTTTAAA (7) 1.9 0.0019