Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.172411	Txnl4	thioredoxin-like 4	18		27366
Mm.172411	D18Wsu98e	DNA segment, Chr 18, Wayne State University 98, expressed	18	18 50.0 cM	28062
Gene Ontology	transferase activity
Human Homolog	MGC10646[hypothetical protein MGC10646]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 70 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GCGAGGGAGC (2) 16.3 0.0163 P8 Cb GC CTGCTCAGTA (2) 1.6 0.0016 P8 Cb GC GAAAACAAAC (4) 1.6 0.0016 P8 Cb GC GCCTCTCTTG (3) 1.6 0.0016 P8 Cb GC TCAGGAAGAG (3) 1.6 0.0016 Cb medulloblastoma GCGAGGGAGC (2) 18.5 0.0185 Cb medulloblastoma GAAAACAAAC (4) 11.6 0.0116 Cb medulloblastoma CTGCTCAGTA (2) 4.6 0.0046 P8 GC+1d culture GCGAGGGAGC (2) 9.1 0.0091 P8 GC+1d culture CTGCTCAGTA (2) 5.7 0.0057 P8 GC+1d culture GAAAACAAAC (4) 1.1 0.0011 P8 GC+SHH+1d culture GCGAGGGAGC (2) 22.2 0.0222 P8 GC+SHH+1d culture CTGCTCAGTA (2) 2.3 0.0023 P8 GC+SHH+1d culture CATCTCCATC (2) 1.2 0.0012 P8 GC+SHH+1d culture CATTTCCATC (4) 1.2 0.0012 P8 GC+SHH+1d culture GTGGTGCAAG (3) 1.2 0.0012 3T3 fibroblasts GTGGTGCAAG (3) 14 0.014 3T3 fibroblasts GCGAGGGAGC (2) 10.5 0.0105 3T3 fibroblasts CTGCTCAGTA (2) 7 0.007 E15 cortex GCGAGGGAGC (2) 19.8 0.0198 E15 cortex CTGCTCAGTA (2) 4.9 0.0049 P1 cortex AGAACCTGGC (4) 4.5 0.0045 Hypothalamus GCGAGGGAGC (2) 27.2 0.0272 Hypothalamus GAGGCACACC (2) 3.6 0.0036 Hypothalamus GCCTCTCTTG (3) 3.6 0.0036 Hypothalamus GAAAACAAAC (4) 1.8 0.0018 Hypothalamus GCTCTCAACC (2) 1.8 0.0018 E12.5 retina GCGAGGGAGC (2) 20.7 0.0207 E12.5 retina CTGCTCAGTA (2) 5.6 0.0056 E12.5 retina GTGGTGCAAG (3) 1.9 0.0019 E14.5 retina GCGAGGGAGC (2) 16.4 0.0164 E14.5 retina CTGCTCAGTA (2) 3.6 0.0036 E14.5 retina CATCTCCATC (2) 1.8 0.0018 E14.5 retina CATTTCCATC (4) 1.8 0.0018 E14.5 retina GTGGTGCAAG (3) 1.8 0.0018 E14.5 retina TCAGGAAGAG (3) 1.8 0.0018 E14.5 retina TCAGGGAAGA (2) 1.8 0.0018 E16.5 retina CTGCTCAGTA (2) 7.2 0.0072 E16.5 retina GCGAGGGAGC (2) 7.2 0.0072 E16.5 retina TCAGGAAGAG (3) 3.6 0.0036 E16.5 retina GAGGCACACC (2) 1.8 0.0018 E16.5 retina GCTCTCAACC (2) 1.8 0.0018 E18.5 retina GCGAGGGAGC (2) 36.4 0.0364 P0.5 retina GCGAGGGAGC (2) 15.7 0.0157 P0.5 retina CTGCTCAGTA (2) 2 0.002 P0.5 retina GTGGTGCAAG (3) 2 0.002 P0.5 retina TCAGGAAGAG (3) 2 0.002 P2.5 retina GCGAGGGAGC (2) 8.8 0.0088 P2.5 retina CTGCTCAGTA (2) 3.5 0.0035 P2.5 retina GCCTCTCTTG (3) 1.8 0.0018 P2.5 retina TCAGGAAGAG (3) 1.8 0.0018 P4.5 retina GCGAGGGAGC (2) 25.8 0.0258 P4.5 retina GTGGTGCAAG (3) 2 0.002 P6.5 retina GCGAGGGAGC (2) 16.7 0.0167 P6.5 retina GTGGTGCAAG (3) 5 0.005 P6.5 retina CATCTCCATC (2) 1.7 0.0017 P6.5 retina CTGCTCAGTA (2) 1.7 0.0017 P10.5 crx- retina GCGAGGGAGC (2) 11.1 0.0111 P10.5 crx- retina CTGCTCAGTA (2) 5.6 0.0056 P10.5 crx+ retina GCGAGGGAGC (2) 25 0.025 P10.5 crx+ retina CTGCTCAGTA (2) 1.9 0.0019 Adult retinal CTGCTCAGTA (2) 3.7 0.0037 Adult retinal AGAACCTGGC (4) 1.9 0.0019 Adult retinal CATTTCCATC (4) 1.9 0.0019 Adult retinal GCGAGGGAGC (2) 1.9 0.0019 Adult retinal GCTCTCAACC (2) 1.9 0.0019 Adult retinal GTGGTGCAAG (3) 1.9 0.0019 ONL CTGCTCAGTA (2) 1.9 0.0019 ONL GCTCTCAACC (2) 1.9 0.0019 ONL GTGGTGCAAG (3) 1.9 0.0019