Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.172605	Rnf11	ring finger protein 11	4		29864
Mm.172605	C76876	expressed sequence C76876	4		97129
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 83 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTTAAATTGT (2) 3.3 0.0033 P8 Cb GC ACTTCATAGT (4) 1.6 0.0016 P8 Cb GC ATGGAAATAT (3) 1.6 0.0016 P8 Cb GC GAGCCAGAGG (8) 1.6 0.0016 P8 Cb GC GTGCAGTCTA (2) 1.6 0.0016 P8 Cb GC TGGGTTCTGA (4) 1.6 0.0016 Cb medulloblastoma ATGGAAATAT (3) 11.6 0.0116 Cb medulloblastoma GTGCAGTCTA (2) 4.6 0.0046 Cb medulloblastoma TGTTTTTTTT (9) 4.6 0.0046 Cb medulloblastoma CACAAAAGTT (3) 2.3 0.0023 Cb medulloblastoma GGATCTACTG (3) 2.3 0.0023 P8 GC+1d culture ATGGAAATAT (3) 4.6 0.0046 P8 GC+1d culture GTGCAGTCTA (2) 3.4 0.0034 P8 GC+1d culture CACAAAAGTT (3) 1.1 0.0011 P8 GC+1d culture GGATCTACTG (3) 1.1 0.0011 P8 GC+1d culture TGGGTTCTGA (4) 1.1 0.0011 P8 GC+1d culture TGTTTTTTTT (9) 1.1 0.0011 P8 GC+SHH+1d culture ATGGAAATAT (3) 3.5 0.0035 P8 GC+SHH+1d culture ACTTCATAGT (4) 1.2 0.0012 P8 GC+SHH+1d culture CACAAAAGTT (3) 1.2 0.0012 P8 GC+SHH+1d culture GAGCCAGAGG (8) 1.2 0.0012 P8 GC+SHH+1d culture GGATCTACTG (3) 1.2 0.0012 P8 GC+SHH+1d culture GTGCAGTCTA (2) 1.2 0.0012 P8 GC+SHH+1d culture TACAGTTGCT (3) 1.2 0.0012 P8 GC+SHH+1d culture TTTAAATTGT (2) 1.2 0.0012 3T3 fibroblasts TGGGTTCTGA (4) 31.5 0.0315 3T3 fibroblasts GAGCCAGAGG (8) 10.5 0.0105 3T3 fibroblasts TACAGTTGCT (3) 3.5 0.0035 E15 cortex GAGCCAGAGG (8) 4.9 0.0049 P1 cortex TTTAAATTGT (2) 9.1 0.0091 P1 cortex GTGCAGTCTA (2) 4.5 0.0045 P1 cortex TGTTTTTTTT (9) 4.5 0.0045 Hypothalamus TGGGTTCTGA (4) 10.9 0.0109 Hypothalamus TTTAAATTGT (2) 5.4 0.0054 Hypothalamus ATGGAAATAT (3) 3.6 0.0036 Hypothalamus GTGCAGTCTA (2) 3.6 0.0036 Hypothalamus TACAGTTGCT (3) 3.6 0.0036 Hypothalamus TCAATTAAAT (2) 1.8 0.0018 E12.5 retina GTGCAGTCTA (2) 7.5 0.0075 E12.5 retina ATGGAAATAT (3) 3.8 0.0038 E12.5 retina TCAATTAAAT (2) 3.8 0.0038 E12.5 retina GAGCCAGAGG (8) 1.9 0.0019 E12.5 retina TGGGTTCTGA (4) 1.9 0.0019 E14.5 retina TGTTTTTTTT (9) 5.5 0.0055 E14.5 retina ATGGAAATAT (3) 1.8 0.0018 E14.5 retina GAGCCAGAGG (8) 1.8 0.0018 E14.5 retina TCAATTAAAT (2) 1.8 0.0018 E14.5 retina TGGGTTCTGA (4) 1.8 0.0018 E16.5 retina ACTTCATAGT (4) 1.8 0.0018 E16.5 retina ATGGAAATAT (3) 1.8 0.0018 E16.5 retina GGATCTACTG (3) 1.8 0.0018 E16.5 retina TGGGTTCTGA (4) 1.8 0.0018 E18.5 retina GGATCTACTG (3) 1.8 0.0018 E18.5 retina GTGCAGTCTA (2) 1.8 0.0018 P0.5 retina TGGGTTCTGA (4) 3.9 0.0039 P0.5 retina ATGGAAATAT (3) 2 0.002 P0.5 retina TGTTTTTTTT (9) 2 0.002 P2.5 retina ATGGAAATAT (3) 1.8 0.0018 P2.5 retina TACAGTTGCT (3) 1.8 0.0018 P2.5 retina TGGGTTCTGA (4) 1.8 0.0018 P4.5 retina ATGGAAATAT (3) 5.9 0.0059 P4.5 retina CACAAAAGTT (3) 2 0.002 P4.5 retina GAGCCAGAGG (8) 2 0.002 P4.5 retina GTGCAGTCTA (2) 2 0.002 P4.5 retina TACAGTTGCT (3) 2 0.002 P4.5 retina TGTTTTTTTT (9) 2 0.002 P6.5 retina ATGGAAATAT (3) 6.7 0.0067 P6.5 retina CACAAAAGTT (3) 5 0.005 P6.5 retina GTGCAGTCTA (2) 3.3 0.0033 P6.5 retina TGGGTTCTGA (4) 1.7 0.0017 P10.5 crx- retina ATGGAAATAT (3) 7.4 0.0074 P10.5 crx- retina TACAGTTGCT (3) 3.7 0.0037 P10.5 crx- retina GTGCAGTCTA (2) 1.9 0.0019 P10.5 crx+ retina TGGGTTCTGA (4) 5.8 0.0058 P10.5 crx+ retina ATGGAAATAT (3) 1.9 0.0019 P10.5 crx+ retina TGTTTTTTTT (9) 1.9 0.0019 P10.5 crx+ retina TTTAAATTGT (2) 1.9 0.0019 Adult retinal ATGGAAATAT (3) 5.6 0.0056 Adult retinal CACAAAAGTT (3) 3.7 0.0037 Adult retinal ACTTCATAGT (4) 1.9 0.0019 Adult retinal TTTAAATTGT (2) 1.9 0.0019 ONL ATGGAAATAT (3) 11.5 0.0115 ONL TTTAAATTGT (2) 1.9 0.0019