Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.172674
Lamb1-1
laminin B1 subunit 1
12
12 20.0 cM
16777
Mm.172674
D130003D08Rik
RIKEN cDNA D130003D08 gene
12
97795
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 70 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GGGCTGCTCA (
7
)
9.8
0.0098
P8 Cb GC
GTGAAGGAAG
(
8
)
4.9
0.0049
P8 Cb GC
GCTCTGACTG (
8
)
1.6
0.0016
Cb medulloblastoma
GGGCTGCTCA (
7
)
6.9
0.0069
Cb medulloblastoma
GGGCTGCTCC (
5
)
2.3
0.0023
Cb medulloblastoma
GGGCTGGCTC (
5
)
2.3
0.0023
Cb medulloblastoma
GTGAAGGAAG
(
8
)
2.3
0.0023
P8 GC+1d culture
GGGCTGCTCA (
7
)
9.1
0.0091
P8 GC+1d culture
AGCAGAGAAA (
9
)
4.6
0.0046
P8 GC+1d culture
GCTCTGACTG (
8
)
4.6
0.0046
P8 GC+1d culture
GGGCTGGCTC (
5
)
4.6
0.0046
P8 GC+1d culture
GTGAAGGAAG
(
8
)
3.4
0.0034
P8 GC+1d culture
GGGCTGCTCC (
5
)
1.1
0.0011
P8 GC+SHH+1d culture
GGGCTGCTCA (
7
)
11.7
0.0117
P8 GC+SHH+1d culture
GCTCTGACTG (
8
)
5.9
0.0059
P8 GC+SHH+1d culture
GGGCTGGCTC (
5
)
3.5
0.0035
P8 GC+SHH+1d culture
GGGCTGCTCC (
5
)
2.3
0.0023
P8 GC+SHH+1d culture
GTGAAGGAAG
(
8
)
2.3
0.0023
P8 GC+SHH+1d culture
AGCAGAGAAA (
9
)
1.2
0.0012
3T3 fibroblasts
GGGCTGGCTC (
5
)
14
0.014
3T3 fibroblasts
GGGCTGCTCA (
7
)
7
0.007
3T3 fibroblasts
TGGACTTGCA (
5
)
3.5
0.0035
E15 cortex
GGGCTGCTCA (
7
)
24.7
0.0247
E15 cortex
GGGCTGGCTC (
5
)
14.8
0.0148
P1 cortex
GGGCTGCTCA (
7
)
4.5
0.0045
P1 cortex
TGGACTTGCA (
5
)
4.5
0.0045
Hypothalamus
GGGCTGCTCA (
7
)
1.8
0.0018
Hypothalamus
GGGCTGGCTC (
5
)
1.8
0.0018
Hypothalamus
TGGACTTGCA (
5
)
1.8
0.0018
E12.5 retina
GGGCTGCTCA (
7
)
20.7
0.0207
E12.5 retina
GTGAAGGAAG
(
8
)
1.9
0.0019
E14.5 retina
GGGCTGCTCA (
7
)
12.8
0.0128
E14.5 retina
AGCAGAGAAA (
9
)
1.8
0.0018
E14.5 retina
GCTCTGACTG (
8
)
1.8
0.0018
E14.5 retina
GGGCTGGCTC (
5
)
1.8
0.0018
E16.5 retina
GGGCTGCTCA (
7
)
9.1
0.0091
E16.5 retina
GCTCTGACTG (
8
)
1.8
0.0018
E18.5 retina
AGCAGAGAAA (
9
)
1.8
0.0018
E18.5 retina
GCTCTGACTG (
8
)
1.8
0.0018
E18.5 retina
GGGCTGCTCA (
7
)
1.8
0.0018
P0.5 retina
GGGCTGCTCA (
7
)
11.8
0.0118
P0.5 retina
GGGCTGGCTC (
5
)
5.9
0.0059
P0.5 retina
TGGACTTGCA (
5
)
2
0.002
P2.5 retina
GGGCTGCTCA (
7
)
8.8
0.0088
P2.5 retina
AGCAGAGAAA (
9
)
3.5
0.0035
P2.5 retina
GTGAAAGGAA (
7
)
1.8
0.0018
P2.5 retina
TGGACTTGCA (
5
)
1.8
0.0018
P4.5 retina
GCTCTGACTG (
8
)
4
0.004
P4.5 retina
GGGCTGGCTC (
5
)
4
0.004
P4.5 retina
AGCAGAGAAA (
9
)
2
0.002
P4.5 retina
GGGCTGCTCA (
7
)
2
0.002
P6.5 retina
GCTCTGACTG (
8
)
8.3
0.0083
P6.5 retina
GGGCTGCTCA (
7
)
5
0.005
P6.5 retina
GGGCTGGCTC (
5
)
3.3
0.0033
P6.5 retina
GTGAAGGAAG
(
8
)
3.3
0.0033
P10.5 crx- retina
GCTCTGACTG (
8
)
29.7
0.0297
P10.5 crx- retina
GGGCTGCTCC (
5
)
9.3
0.0093
P10.5 crx- retina
GGGCTGCTCA (
7
)
5.6
0.0056
P10.5 crx- retina
GGGCTGGCTC (
5
)
1.9
0.0019
P10.5 crx- retina
GTGAAGGAAG
(
8
)
1.9
0.0019
P10.5 crx+ retina
GCTCTGACTG (
8
)
17.3
0.0173
P10.5 crx+ retina
GGGCTGCTCC (
5
)
17.3
0.0173
P10.5 crx+ retina
GGGCTGCTCA (
7
)
5.8
0.0058
P10.5 crx+ retina
TGGACTTGCA (
5
)
3.8
0.0038
P10.5 crx+ retina
GGGCTGGCTC (
5
)
1.9
0.0019
Adult retinal
GCTCTGACTG (
8
)
14.8
0.0148
Adult retinal
GGGCTGGCTC (
5
)
5.6
0.0056
Adult retinal
GGGCTGCTCA (
7
)
1.9
0.0019
ONL
GCTCTGACTG (
8
)
36.4
0.0364
ONL
GTGAAAGGAA (
7
)
1.9
0.0019
