Mouse Retina SAGE Library    [Home]    [Libraries]    [Images]
Gene:              Accession:    
e.g., Rho or Rhodopsin e.g., BG297543 batch search
Tag:        Cytoband (Mm):    
e.g., CCCAGTTCAC e.g., 6 E3
Unigene:        Cytoband (Hs):    
e.g., Mm.2965 batch search e.g., 3q21-q24

 UniGene  Symbol  Name  Chr  Cytoband  LocusLink 
 Mm.173953 D19Mgi11DNA Segment, Chr 19, Mouse Genome Informatics 11 19    107113 
 Mm.173953 Smc6l1SMC6 structural maintenance of chromosomes 6-like 1 (yeast) 12  12 A2  67241 
 Human Homolog SMC6L1[SMC6 structural maintenance of chromosomes 6-like 1 (yeast)]
 Clusters 
   Neighbors    

No In Situ Hybridization images could be found.



SAGE Tags

Total 102 tags found with positive counts.

  all tags    reliable tags    sum by library with all tags    sum by library with reliable tags  
 Library  Tag (Other Genes)  Normalized Count  % in library 
P8 Cb GCAGATAATTTT
CCCTCCCCCC
TACATATCTG (4)
TGAGATGATA (3)
TGTGTGTGTG (2)
45.60.0456
Cb medulloblastomaAAGAATTTGT
AGATAATTTT
AGCTCCCTTC (2)
CCCTCCCCCC
TACCACACAC (2)
TGTGTGTGTG (2)
53.10.0531
P8 GC+1d cultureAGATAATTTT
CCCTCCCCCC
CGCCATTACT (3)
TACATATCTG (4)
TACCACACAC (2)
TGTGTGTGTG (2)
52.40.0524
P8 GC+SHH+1d cultureCCCTCCCCCC
CGCCATTACT (3)
CTGCCACGTG (2)
GCTGTGACAG
TACATATCTG (4)
TGAGATGATA (3)
TGTGTGTGTG (2)
46.90.0469
3T3 fibroblastsCCCTCCCCCC
CGCCATTACT (3)
CTGCCACGTG (2)
TACCACACAC (2)
TGCATTATGT (2)
TGTGTGTGTG (2)
490.049
E15 cortexCCCTCCCCCC
TACCACACAC (2)
24.70.0247
P1 cortexAAGAATTTGT
CGCCATTACT (3)
TGCATTATGT (2)
TGTGTGTGTG (2)
31.70.0317
HypothalamusAAGAATTTGT
AGATAATTTT
CGCCATTACT (3)
GCTGTGACAG
TACCACACAC (2)
TGAGATGATA (3)
TGTGTGTGTG (2)
41.60.0416
E12.5 retinaCCCTCCCCCC
CTGCCACGTG (2)
TACCACACAC (2)
TGTGTGTGTG (2)
58.30.0583
E14.5 retinaCAATCCCAAA (2)
CCCTCCCCCC
CGCCATTACT (3)
GCTGTGACAG
TACATATCTG (4)
TGTGTGTGTG (2)
63.70.0637
E16.5 retinaCCCTCCCCCC
TACATATCTG (4)
TACCACACAC (2)
TGCATTATGT (2)
TGTGTGTGTG (2)
59.70.0597
E18.5 retinaAGATAATTTT
AGCTCCCTTC (2)
CCCTCCCCCC
CGCCATTACT (3)
TACATATCTG (4)
TGCATTATGT (2)
TGTGTGTGTG (2)
690.069
P0.5 retinaAGAGTGGAGC
CAATCCCAAA (2)
CCCTCCCCCC
CGCCATTACT (3)
TGTGTGTGTG (2)
49.20.0492
P2.5 retinaCCCTCCCCCC
TACATATCTG (4)
TGTGTGTGTG (2)
TTAAAGAAAC (2)
47.60.0476
P4.5 retinaCCCTCCCCCC
CGCCATTACT (3)
TACATATCTG (4)
TGCATTATGT (2)
TGTGTGTGTG (2)
71.40.0714
P6.5 retinaAGATAATTTT
AGCTCCCTTC (2)
CCCTCCCCCC
CGCCATTACT (3)
TACATATCTG (4)
TGTGTGTGTG (2)
TTAAAGAAAC (2)
55.10.0551
P10.5 crx- retinaAGCTCCCTTC (2)
CCCTCCCCCC
TGTGTGTGTG (2)
63.20.0632
P10.5 crx+ retinaCCCTCCCCCC
CGCCATTACT (3)
GCTGTGACAG
TGTGTGTGTG (2)
57.60.0576
Adult retinalCCCTCCCCCC
CGCCATTACT (3)
TGTGTGTGTG (2)
64.90.0649
ONLCAATCCCAAA (2)
CCCTCCCCCC
TGAGATGATA (3)
TGCATTATGT (2)
TGTGTGTGTG (2)
TTAAAGAAAC (2)
36.30.0363