Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.174256	Tpr	translocated promoter region	1		108989
Gene Ontology	biological_process unknown | molecular_function unknown | nuclear membrane | nucleus
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 93 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GGAGCAGGAG (5) 6.5 0.0065 P8 Cb GC TGAATAAGAT (3) 6.5 0.0065 P8 Cb GC CCTTTAGTCC (27) 1.6 0.0016 P8 Cb GC CTGCTGATGT (2) 1.6 0.0016 P8 Cb GC TGAATAAAAT (2) 1.6 0.0016 Cb medulloblastoma GGAGCAGGAG (5) 20.8 0.0208 Cb medulloblastoma GGAGAACCTT (4) 11.6 0.0116 Cb medulloblastoma TGAATAAGAT (3) 4.6 0.0046 P8 GC+1d culture GGAGCAGGAG (5) 11.4 0.0114 P8 GC+1d culture CCTTTAGTCC (27) 10.3 0.0103 P8 GC+1d culture GGAGAACCTT (4) 3.4 0.0034 P8 GC+1d culture TGAATAAGAT (3) 3.4 0.0034 P8 GC+1d culture CTGCTGATGT (2) 1.1 0.0011 P8 GC+1d culture GGCTGAACAC 1.1 0.0011 P8 GC+SHH+1d culture GGAGCAGGAG (5) 10.5 0.0105 P8 GC+SHH+1d culture TGAATAAGAT (3) 7 0.007 P8 GC+SHH+1d culture CCTTTAGTCC (27) 3.5 0.0035 P8 GC+SHH+1d culture TGAATAAAAT (2) 2.3 0.0023 P8 GC+SHH+1d culture GAAGCAGGAG (2) 1.2 0.0012 P8 GC+SHH+1d culture GGAGAACCTT (4) 1.2 0.0012 3T3 fibroblasts GGAGCAGGAG (5) 3.5 0.0035 E15 cortex GGAGCAGGAG (5) 19.8 0.0198 E15 cortex CCTTTAGTCC (27) 9.9 0.0099 E15 cortex GGAGAACCTT (4) 4.9 0.0049 P1 cortex CCTTTAGTCC (27) 27.3 0.0273 P1 cortex GGAGCAGGAG (5) 9.1 0.0091 P1 cortex AAGATTATGA (2) 4.5 0.0045 Hypothalamus GGAGAACCTT (4) 14.5 0.0145 Hypothalamus GGAGCAGGAG (5) 14.5 0.0145 Hypothalamus TGAATAAGAT (3) 7.2 0.0072 Hypothalamus CCTTTAGTCC (27) 3.6 0.0036 Hypothalamus CTGCTGATGT (2) 1.8 0.0018 E12.5 retina GGAGAACCTT (4) 26.3 0.0263 E12.5 retina GGAGCAGGAG (5) 16.9 0.0169 E12.5 retina CCTTTAGTCC (27) 5.6 0.0056 E12.5 retina TGAATAAGAT (3) 3.8 0.0038 E12.5 retina CTGCTGATGT (2) 1.9 0.0019 E14.5 retina GGAGCAGGAG (5) 16.4 0.0164 E14.5 retina CCTTTAGTCC (27) 14.6 0.0146 E14.5 retina GGAGAACCTT (4) 12.8 0.0128 E14.5 retina TGAATAAGAT (3) 3.6 0.0036 E16.5 retina GGAGAACCTT (4) 23.5 0.0235 E16.5 retina TGAATAAGAT (3) 7.2 0.0072 E16.5 retina CCTTTAGTCC (27) 5.4 0.0054 E16.5 retina GGAGCAGGAG (5) 5.4 0.0054 E16.5 retina ATTACGCCAA (233) 1.8 0.0018 E18.5 retina GGAGAACCTT (4) 10.9 0.0109 E18.5 retina GGAGCAGGAG (5) 9.1 0.0091 E18.5 retina TGAATAAGAT (3) 9.1 0.0091 E18.5 retina CCTTTAGTCC (27) 5.5 0.0055 P0.5 retina GGAGCAGGAG (5) 19.6 0.0196 P0.5 retina GGAGAACCTT (4) 11.8 0.0118 P0.5 retina CCTTTAGTCC (27) 7.9 0.0079 P0.5 retina GAAGCAGGAG (2) 3.9 0.0039 P0.5 retina AAGATTATGA (2) 2 0.002 P0.5 retina ATTACGCCAA (233) 2 0.002 P0.5 retina TGAATAAGAT (3) 2 0.002 P2.5 retina GGAGAACCTT (4) 10.6 0.0106 P2.5 retina GGAGCAGGAG (5) 10.6 0.0106 P2.5 retina TGAATAAGAT (3) 8.8 0.0088 P2.5 retina CCTTTAGTCC (27) 5.3 0.0053 P4.5 retina GGAGCAGGAG (5) 17.8 0.0178 P4.5 retina GGAGAACCTT (4) 9.9 0.0099 P4.5 retina CCTTTAGTCC (27) 4 0.004 P4.5 retina TGAATAAGAT (3) 4 0.004 P4.5 retina CTGCTGATGT (2) 2 0.002 P4.5 retina TGAATAAAAT (2) 2 0.002 P6.5 retina GGAGCAGGAG (5) 26.7 0.0267 P6.5 retina TGAATAAGAT (3) 8.3 0.0083 P6.5 retina CCTTTAGTCC (27) 3.3 0.0033 P6.5 retina GGAGAACCTT (4) 3.3 0.0033 P10.5 crx- retina GGAGCAGGAG (5) 20.4 0.0204 P10.5 crx- retina GGAGAACCTT (4) 13 0.013 P10.5 crx- retina TGAATAAGAT (3) 11.1 0.0111 P10.5 crx- retina CTGCTGATGT (2) 3.7 0.0037 P10.5 crx- retina CCTTTAGTCC (27) 1.9 0.0019 P10.5 crx+ retina GGAGAACCTT (4) 32.7 0.0327 P10.5 crx+ retina GGAGCAGGAG (5) 26.9 0.0269 P10.5 crx+ retina CCTTTAGTCC (27) 5.8 0.0058 P10.5 crx+ retina CTGCTGATGT (2) 1.9 0.0019 P10.5 crx+ retina TGAATAAAAT (2) 1.9 0.0019 Adult retinal GGAGCAGGAG (5) 37 0.037 Adult retinal ATTACGCCAA (233) 3.7 0.0037 Adult retinal CCTTTAGTCC (27) 3.7 0.0037 Adult retinal GGAGAACCTT (4) 3.7 0.0037 Adult retinal GGCTGAACAC 3.7 0.0037 ONL GGAGCAGGAG (5) 9.6 0.0096 ONL CCTTTAGTCC (27) 7.7 0.0077 ONL AAGATTATGA (2) 3.8 0.0038 ONL TGAATAAAAT (2) 3.8 0.0038 ONL GAAGCAGGAG (2) 1.9 0.0019 ONL GGAGAACCTT (4) 1.9 0.0019 ONL GGCTGAACAC 1.9 0.0019