Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.17461	Stk16	serine/threonine kinase 16	1	11 A1 (11 9.0 cM)	20872
Gene Ontology	ATP binding | kinase activity | protein amino acid phosphorylation | protein kinase activity | protein serine/threonine kinase activity | protein-tyrosine kinase activity | transferase activity
Human Homolog	STK16[serine/threonine kinase 16]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 11 In Situ Hybridization Images

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SAGE Tags

Total 117 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ACCCGCCGGG 125.6 0.1256 P8 Cb GC AAGCCTGGCT (5) 6.5 0.0065 P8 Cb GC GTGCTCCCTG (4) 3.3 0.0033 P8 Cb GC ATGTTTGGGG 1.6 0.0016 P8 Cb GC CTATTAAAAG (4) 1.6 0.0016 P8 Cb GC CTGAGCAACA (4) 1.6 0.0016 P8 Cb GC GAAAAAAAAC (8) 1.6 0.0016 P8 Cb GC GCTCCAGCCC (3) 1.6 0.0016 Cb medulloblastoma ACCCGCCGGG 448.6 0.4486 Cb medulloblastoma CTATTAAAAG (4) 11.6 0.0116 Cb medulloblastoma GACCTGAAGC (5) 4.6 0.0046 Cb medulloblastoma GTGCTCCCTG (4) 4.6 0.0046 Cb medulloblastoma CAAGGAGACT (2) 2.3 0.0023 Cb medulloblastoma GAAAAAAAAC (8) 2.3 0.0023 Cb medulloblastoma GCTCCAGCCC (3) 2.3 0.0023 P8 GC+1d culture GTGCTCCCTG (4) 10.3 0.0103 P8 GC+1d culture ATGTTTGGGG 6.8 0.0068 P8 GC+1d culture GACCTGAAGC (5) 5.7 0.0057 P8 GC+1d culture CTGAGCAACA (4) 2.3 0.0023 P8 GC+1d culture AAACAGAAAA (6) 1.1 0.0011 P8 GC+1d culture AAGCCTGGCT (5) 1.1 0.0011 P8 GC+1d culture GAAAAAAAAC (8) 1.1 0.0011 P8 GC+SHH+1d culture ACCCGCCGGG 5.9 0.0059 P8 GC+SHH+1d culture CTGAGCAACA (4) 4.7 0.0047 P8 GC+SHH+1d culture GACCTGAAGC (5) 4.7 0.0047 P8 GC+SHH+1d culture GTGCTCCCTG (4) 2.3 0.0023 P8 GC+SHH+1d culture AAGCCTGGCT (5) 1.2 0.0012 P8 GC+SHH+1d culture ATGTTTGGGG 1.2 0.0012 P8 GC+SHH+1d culture GAAAAAAAAC (8) 1.2 0.0012 3T3 fibroblasts ACCCGCCGGG 14 0.014 3T3 fibroblasts GTGCTCCCTG (4) 10.5 0.0105 3T3 fibroblasts AAGCCTGGCT (5) 3.5 0.0035 3T3 fibroblasts CTGAGCAACA (4) 3.5 0.0035 3T3 fibroblasts GACCTGAAGC (5) 3.5 0.0035 E15 cortex ACCCGCCGGG 74.2 0.0742 E15 cortex GACCTGAAGC (5) 9.9 0.0099 E15 cortex CTGAGCAACA (4) 4.9 0.0049 E15 cortex GTGCTCCCTG (4) 4.9 0.0049 P1 cortex GTGCTCCCTG (4) 13.6 0.0136 Hypothalamus CTGAGCAACA (4) 9.1 0.0091 Hypothalamus ACCCGCCGGG 7.2 0.0072 Hypothalamus CAAGGAGACT (2) 3.6 0.0036 Hypothalamus CTATTAAAAG (4) 3.6 0.0036 Hypothalamus GACCTGAAGC (5) 1.8 0.0018 Hypothalamus GCTCCAGCCC (3) 1.8 0.0018 E12.5 retina CTGAGCAACA (4) 3.8 0.0038 E12.5 retina GACCTGAAGC (5) 1.9 0.0019 E14.5 retina CTGAGCAACA (4) 3.6 0.0036 E14.5 retina GACCTGAAGC (5) 3.6 0.0036 E14.5 retina CAAGGAGACT (2) 1.8 0.0018 E14.5 retina GCTCCAGCCC (3) 1.8 0.0018 E16.5 retina ATGTTTTGCA 5.4 0.0054 E16.5 retina GACCTGAAGC (5) 5.4 0.0054 E16.5 retina CTGAGCAACA (4) 3.6 0.0036 E16.5 retina AAGCCTGGCT (5) 1.8 0.0018 E16.5 retina ACCCGCCGGG 1.8 0.0018 E16.5 retina ATGTTTGGGG 1.8 0.0018 E16.5 retina CAAGGAGACT (2) 1.8 0.0018 E16.5 retina GCTCCAGCCC (3) 1.8 0.0018 E16.5 retina GTGCTCCCTG (4) 1.8 0.0018 E18.5 retina ACCCGCCGGG 7.3 0.0073 E18.5 retina GACCTGAAGC (5) 7.3 0.0073 E18.5 retina AAGCCTGGCT (5) 3.6 0.0036 E18.5 retina ATGTTTGGGG 1.8 0.0018 P0.5 retina GACCTGAAGC (5) 7.9 0.0079 P0.5 retina GTGCTCCCTG (4) 7.9 0.0079 P0.5 retina ACCCGCCGGG 5.9 0.0059 P0.5 retina ATGTTTTGCA 3.9 0.0039 P0.5 retina CTGAGCAACA (4) 3.9 0.0039 P0.5 retina ATGTTTGGGG 2 0.002 P0.5 retina GAAAAAAAAC (8) 2 0.002 P2.5 retina GTGCTCCCTG (4) 7 0.007 P2.5 retina ACCCGCCGGG 1.8 0.0018 P2.5 retina CAAGGAGACT (2) 1.8 0.0018 P2.5 retina CTGAGCAACA (4) 1.8 0.0018 P2.5 retina GAAAAAAAAC (8) 1.8 0.0018 P4.5 retina ACCCGCCGGG 5.9 0.0059 P4.5 retina GACCTGAAGC (5) 5.9 0.0059 P4.5 retina ATGTTTGGGG 2 0.002 P4.5 retina CAAGGAGACT (2) 2 0.002 P4.5 retina CTGAGCAACA (4) 2 0.002 P4.5 retina GCTGACAGTG (5) 2 0.002 P6.5 retina CTGAGCAACA (4) 6.7 0.0067 P6.5 retina GTGCTCCCTG (4) 3.3 0.0033 P6.5 retina ACCCGCCGGG 1.7 0.0017 P6.5 retina CAAGGAGACT (2) 1.7 0.0017 P6.5 retina GAAAAAAAAC (8) 1.7 0.0017 P6.5 retina GACCTGAAGC (5) 1.7 0.0017 P6.5 retina GCTGACAGTG (5) 1.7 0.0017 P10.5 crx- retina CTGAGCAACA (4) 9.3 0.0093 P10.5 crx- retina GACCTGAAGC (5) 5.6 0.0056 P10.5 crx- retina AGCAGCAAGA (5) 3.7 0.0037 P10.5 crx- retina ACCCGCCGGG 1.9 0.0019 P10.5 crx- retina ATGTTTTGCA 1.9 0.0019 P10.5 crx- retina GCTGACAGTG (5) 1.9 0.0019 P10.5 crx+ retina ACCCGCCGGG 96.1 0.0961 P10.5 crx+ retina GACCTGAAGC (5) 5.8 0.0058 P10.5 crx+ retina GAAAAAAAAC (8) 3.8 0.0038 P10.5 crx+ retina AAGCCTGGCT (5) 1.9 0.0019 P10.5 crx+ retina AGCAGCAAGA (5) 1.9 0.0019 P10.5 crx+ retina ATGTTTGGGG 1.9 0.0019 P10.5 crx+ retina CTATTAAAAG (4) 1.9 0.0019 Adult retinal ACCCGCCGGG 5.6 0.0056 Adult retinal GCTGACAGTG (5) 5.6 0.0056 Adult retinal ATGTTTGGGG 3.7 0.0037 Adult retinal ATGTTTTGCA 3.7 0.0037 Adult retinal CTATTAAAAG (4) 3.7 0.0037 Adult retinal GACCTGAAGC (5) 3.7 0.0037 Adult retinal GCTCCAGCCC (3) 1.9 0.0019 Adult retinal GTGCTCCCTG (4) 1.9 0.0019 ONL AAACAGAAAA (6) 3.8 0.0038 ONL GACCTGAAGC (5) 3.8 0.0038 ONL GTGCTCCCTG (4) 3.8 0.0038 ONL ACCCGCCGGG 1.9 0.0019 ONL ATGTTTTGCA 1.9 0.0019 ONL GCTCCAGCCC (3) 1.9 0.0019 ONL GCTGACAGTG (5) 1.9 0.0019