Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.17484	Snca	synuclein, alpha	6	6 29.0 cM	20617
Gene Ontology	cytoplasm
Human Homolog	SNCA[synuclein, alpha (non A4 component of amyloid precursor)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 37 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CTCACATAAC (3) 13.1 0.0131 P8 Cb GC AGACTATGCA 6.5 0.0065 Cb medulloblastoma CTCACATAAC (3) 16.2 0.0162 Cb medulloblastoma AGACTATGCA 9.2 0.0092 P8 GC+1d culture AGACTATGCA 30.8 0.0308 P8 GC+1d culture CTCACATAAC (3) 24 0.024 P8 GC+SHH+1d culture AGACTATGCA 24.6 0.0246 P8 GC+SHH+1d culture CTCACATAAC (3) 21.1 0.0211 E15 cortex CTCACATAAC (3) 29.7 0.0297 P1 cortex CTCACATAAC (3) 36.4 0.0364 P1 cortex AGACTATGCA 4.5 0.0045 Hypothalamus AGACTATGCA 16.3 0.0163 Hypothalamus CTCACATAAC (3) 9.1 0.0091 E12.5 retina CTCACATAAC (3) 9.4 0.0094 E12.5 retina AGACTATGCA 1.9 0.0019 E14.5 retina AGACTATGCA 10.9 0.0109 E16.5 retina AGACTATGCA 12.7 0.0127 E16.5 retina CTCACATAAC (3) 10.9 0.0109 E18.5 retina CTCACATAAC (3) 12.7 0.0127 E18.5 retina AGACTATGCA 1.8 0.0018 P0.5 retina AGACTATGCA 11.8 0.0118 P0.5 retina CTCACATAAC (3) 11.8 0.0118 P2.5 retina CTCACATAAC (3) 21.1 0.0211 P2.5 retina AGACTATGCA 3.5 0.0035 P4.5 retina CTCACATAAC (3) 15.9 0.0159 P4.5 retina AGACTATGCA 9.9 0.0099 P6.5 retina CTCACATAAC (3) 18.3 0.0183 P6.5 retina AGACTATGCA 3.3 0.0033 P10.5 crx- retina AGACTATGCA 31.6 0.0316 P10.5 crx- retina CTCACATAAC (3) 9.3 0.0093 P10.5 crx- retina ACCTTTTCTC 3.7 0.0037 P10.5 crx+ retina AGACTATGCA 5.8 0.0058 P10.5 crx+ retina CTCACATAAC (3) 3.8 0.0038 P10.5 crx+ retina ACCTTTTCTC 1.9 0.0019 Adult retinal AGACTATGCA 9.3 0.0093 Adult retinal CTCACATAAC (3) 7.4 0.0074 ONL CTCACATAAC (3) 3.8 0.0038