Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.17708	Atp6v0d1	ATPase, H+ transporting, V0 subunit D isoform 1	8		11972
Gene Ontology	ATP biosynthesis | ATP synthesis coupled proton transport | hydrogen ion transporter activity | hydrogen-exporting ATPase activity, phosphorylative mechanism | hydrogen-transporting ATP synthase activity, rotational mechanism | hydrogen-transporting ATPase activity, rotational mechanism | hydrolase activity | proton transport | proton-transporting two-sector ATPase complex
Human Homolog	ATP6V0D1[ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d isoform 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 94 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTCAAAAAAA (25) 13.1 0.0131 P8 Cb GC GTGGCTTACA (19) 11.4 0.0114 P8 Cb GC TGGTTGCTGA (15) 3.3 0.0033 P8 Cb GC TCCCTCCTTA (3) 1.6 0.0016 Cb medulloblastoma TTCAAAAAAA (25) 37 0.037 Cb medulloblastoma GTGGCTTACA (19) 23.1 0.0231 Cb medulloblastoma TCCCTCCTTA (3) 4.6 0.0046 Cb medulloblastoma GCCTCTCGGG (3) 2.3 0.0023 Cb medulloblastoma TGGTTGCTGA (15) 2.3 0.0023 P8 GC+1d culture GTGGCTTACA (19) 30.8 0.0308 P8 GC+1d culture TTCAAAAAAA (25) 12.6 0.0126 P8 GC+1d culture TCCCTCCTTA (3) 4.6 0.0046 P8 GC+1d culture GCCTCTCGGG (3) 2.3 0.0023 P8 GC+1d culture TCAGTGGCTG 1.1 0.0011 P8 GC+SHH+1d culture GTGGCTTACA (19) 36.3 0.0363 P8 GC+SHH+1d culture TTCAAAAAAA (25) 29.3 0.0293 P8 GC+SHH+1d culture TCCCTCCTTA (3) 4.7 0.0047 P8 GC+SHH+1d culture GCCTCTCGGG (3) 3.5 0.0035 P8 GC+SHH+1d culture TGGTTGCTGA (15) 2.3 0.0023 3T3 fibroblasts GTGGCTTACA (19) 35 0.035 3T3 fibroblasts TGGTTGCTGA (15) 7 0.007 3T3 fibroblasts GCCTCTCGGG (3) 3.5 0.0035 E15 cortex TTCAAAAAAA (25) 29.7 0.0297 E15 cortex GTGGCTTACA (19) 19.8 0.0198 E15 cortex TGGTTGCTGA (15) 4.9 0.0049 P1 cortex GTGGCTTACA (19) 22.7 0.0227 P1 cortex TTCAAAAAAA (25) 4.5 0.0045 Hypothalamus GTGGCTTACA (19) 23.5 0.0235 Hypothalamus TTCAAAAAAA (25) 7.2 0.0072 Hypothalamus ACCCCTTCTG (2) 3.6 0.0036 Hypothalamus TCCCTCCTTA (3) 3.6 0.0036 Hypothalamus GAAGCTGGGC (2) 1.8 0.0018 Hypothalamus TCAGTGGCTG 1.8 0.0018 Hypothalamus TGGTTGCTGA (15) 1.8 0.0018 E12.5 retina GTGGCTTACA (19) 43.2 0.0432 E12.5 retina TTCAAAAAAA (25) 9.4 0.0094 E12.5 retina TCCCTCCTTA (3) 3.8 0.0038 E12.5 retina TCAGTGGCTG 1.9 0.0019 E12.5 retina TGGTTGCTGA (15) 1.9 0.0019 E14.5 retina GTGGCTTACA (19) 51 0.051 E14.5 retina TGGTTGCTGA (15) 21.9 0.0219 E14.5 retina TTCAAAAAAA (25) 20 0.02 E14.5 retina TCCCTCCTTA (3) 9.1 0.0091 E16.5 retina GTGGCTTACA (19) 50.7 0.0507 E16.5 retina TGGTTGCTGA (15) 19.9 0.0199 E16.5 retina TTCAAAAAAA (25) 9.1 0.0091 E16.5 retina TCCCTCCTTA (3) 3.6 0.0036 E16.5 retina GAAGCTGGGC (2) 1.8 0.0018 E16.5 retina TCAGTGGCTG 1.8 0.0018 E18.5 retina GTGGCTTACA (19) 40 0.04 E18.5 retina TTCAAAAAAA (25) 36.4 0.0364 E18.5 retina TCCCTCCTTA (3) 3.6 0.0036 E18.5 retina TCAGTGGCTG 1.8 0.0018 E18.5 retina TGGTTGCTGA (15) 1.8 0.0018 P0.5 retina GTGGCTTACA (19) 45.1 0.0451 P0.5 retina TTCAAAAAAA (25) 9.8 0.0098 P0.5 retina TCCCTCCTTA (3) 3.9 0.0039 P0.5 retina TGGTTGCTGA (15) 2 0.002 P2.5 retina GTGGCTTACA (19) 21.1 0.0211 P2.5 retina TCCCTCCTTA (3) 12.3 0.0123 P2.5 retina TTCAAAAAAA (25) 7 0.007 P2.5 retina TGGTTGCTGA (15) 1.8 0.0018 P4.5 retina TTCAAAAAAA (25) 31.7 0.0317 P4.5 retina GTGGCTTACA (19) 25.8 0.0258 P4.5 retina TCCCTCCTTA (3) 5.9 0.0059 P4.5 retina TGGTTGCTGA (15) 5.9 0.0059 P6.5 retina GTGGCTTACA (19) 35 0.035 P6.5 retina TCCCTCCTTA (3) 11.7 0.0117 P6.5 retina TGGTTGCTGA (15) 8.3 0.0083 P6.5 retina TTCAAAAAAA (25) 8.3 0.0083 P6.5 retina TTTAAGAAAC 3.3 0.0033 P6.5 retina GAAGCTGGGC (2) 1.7 0.0017 P10.5 crx- retina GTGGCTTACA (19) 24.2 0.0242 P10.5 crx- retina TCCCTCCTTA (3) 5.6 0.0056 P10.5 crx- retina TTCAAAAAAA (25) 5.6 0.0056 P10.5 crx- retina CTGGCCTTTC (4) 3.7 0.0037 P10.5 crx- retina TGGTTGCTGA (15) 1.9 0.0019 P10.5 crx+ retina GTGGCTTACA (19) 32.7 0.0327 P10.5 crx+ retina TTCAAAAAAA (25) 9.6 0.0096 P10.5 crx+ retina GCCTCTCGGG (3) 3.8 0.0038 P10.5 crx+ retina TGGTTGCTGA (15) 3.8 0.0038 P10.5 crx+ retina ACCCCTTCTG (2) 1.9 0.0019 P10.5 crx+ retina CTGGCCTTTC (4) 1.9 0.0019 Adult retinal GTGGCTTACA (19) 18.5 0.0185 Adult retinal TTCAAAAAAA (25) 5.6 0.0056 Adult retinal GAAGCTGGGC (2) 1.9 0.0019 Adult retinal TCCCTCCTTA (3) 1.9 0.0019 Adult retinal TGGTTGCTGA (15) 1.9 0.0019 ONL GTGGCTTACA (19) 30.6 0.0306 ONL TGGTTGCTGA (15) 11.5 0.0115 ONL TTCAAAAAAA (25) 3.8 0.0038 ONL GCCTCTCGGG (3) 1.9 0.0019 ONL TCCCTCCTTA (3) 1.9 0.0019 ONL TTTAAGAAAC 1.9 0.0019