Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.177761	AL118368	expressed sequence AL118368	16		404589
Mm.177761	Clcn2	chloride channel 2	16	16 16.0 cM	12724
Gene Ontology	chloride transport | integral to membrane | ion channel activity | ion transport | membrane | voltage-gated chloride channel activity | voltage-gated ion channel activity
Human Homolog	CLCN2[chloride channel 2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 57 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TATAGAAAAA (6) 6.5 0.0065 P8 Cb GC AGTGGCTAAT (3) 1.6 0.0016 P8 Cb GC ATTGCTGTCA (2) 1.6 0.0016 P8 Cb GC CGCTCTGGGG (3) 1.6 0.0016 Cb medulloblastoma TATAGAAAAA (6) 11.6 0.0116 Cb medulloblastoma AGTGGCTAAT (3) 9.2 0.0092 Cb medulloblastoma GCACTGGTCA (2) 4.6 0.0046 Cb medulloblastoma TGGATCAAGT (3) 2.3 0.0023 P8 GC+1d culture AGTGGCTAAT (3) 6.8 0.0068 P8 GC+1d culture TATAGAAAAA (6) 2.3 0.0023 P8 GC+1d culture CGCTCTGGGG (3) 1.1 0.0011 P8 GC+SHH+1d culture TATAGAAAAA (6) 7 0.007 P8 GC+SHH+1d culture AGTGGCTAAT (3) 3.5 0.0035 P8 GC+SHH+1d culture CGCTCTGGGG (3) 1.2 0.0012 P8 GC+SHH+1d culture GCACTGGTCA (2) 1.2 0.0012 3T3 fibroblasts ATTGCTGTCA (2) 7 0.007 3T3 fibroblasts CGCTCTGGGG (3) 3.5 0.0035 E15 cortex AGTGGCTAAT (3) 4.9 0.0049 E15 cortex TGGATCAAGT (3) 4.9 0.0049 P1 cortex TGGATCAAGT (3) 27.3 0.0273 P1 cortex AGTGGCTAAT (3) 4.5 0.0045 P1 cortex CGCTCTGGGG (3) 4.5 0.0045 P1 cortex TATAGAAAAA (6) 4.5 0.0045 Hypothalamus AGTGGCTAAT (3) 3.6 0.0036 Hypothalamus GCACTGGTCA (2) 1.8 0.0018 E12.5 retina TATAGAAAAA (6) 22.5 0.0225 E12.5 retina CGCTCTGGGG (3) 1.9 0.0019 E14.5 retina TATAGAAAAA (6) 9.1 0.0091 E16.5 retina TATAGAAAAA (6) 7.2 0.0072 E16.5 retina TGGATCAAGT (3) 3.6 0.0036 E18.5 retina TATAGAAAAA (6) 18.2 0.0182 E18.5 retina AGTGGCTAAT (3) 1.8 0.0018 E18.5 retina GCACTGGTCA (2) 1.8 0.0018 P0.5 retina TATAGAAAAA (6) 7.9 0.0079 P0.5 retina CGCTCTGGGG (3) 5.9 0.0059 P0.5 retina TGGATCAAGT (3) 2 0.002 P2.5 retina TATAGAAAAA (6) 7 0.007 P2.5 retina TGGATCAAGT (3) 3.5 0.0035 P4.5 retina TATAGAAAAA (6) 15.9 0.0159 P4.5 retina AGTGGCTAAT (3) 2 0.002 P4.5 retina CGCTCTGGGG (3) 2 0.002 P4.5 retina TGGATCAAGT (3) 2 0.002 P6.5 retina TATAGAAAAA (6) 6.7 0.0067 P10.5 crx- retina CGCTCTGGGG (3) 3.7 0.0037 P10.5 crx- retina TGGATCAAGT (3) 3.7 0.0037 P10.5 crx- retina AGTGGCTAAT (3) 1.9 0.0019 P10.5 crx- retina TATAGAAAAA (6) 1.9 0.0019 P10.5 crx+ retina AGTGGCTAAT (3) 3.8 0.0038 P10.5 crx+ retina CGCTCTGGGG (3) 1.9 0.0019 P10.5 crx+ retina TATAGAAAAA (6) 1.9 0.0019 Adult retinal CGCTCTGGGG (3) 3.7 0.0037 Adult retinal TGGATCAAGT (3) 3.7 0.0037 Adult retinal ATTGCTGTCA (2) 1.9 0.0019 Adult retinal GCACTGGTCA (2) 1.9 0.0019 ONL TATAGAAAAA (6) 9.6 0.0096 ONL GCACTGGTCA (2) 1.9 0.0019 ONL TGGATCAAGT (3) 1.9 0.0019