Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.17815	Slc9a6	solute carrier family 9 (sodium/hydrogen exchanger), isoform 6	X		236794
Gene Ontology	antiporter activity | integral to membrane | ion transport | membrane | mitochondrion | mitochondrion | regulation of pH | sodium ion transport | sodium:hydrogen antiporter activity | solute:hydrogen antiporter activity | transport
Human Homolog	SLC9A6[solute carrier family 9 (sodium/hydrogen exchanger), isoform 6]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 37 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TCTCTGAATG (2) 6.5 0.0065 Cb medulloblastoma TCTCTGAATG (2) 6.9 0.0069 Cb medulloblastoma TTAAAGGTAA 4.6 0.0046 Cb medulloblastoma TGTTACTTTT (2) 2.3 0.0023 P8 GC+1d culture TGTTACTTTT (2) 4.6 0.0046 P8 GC+1d culture TCTCTGAATG (2) 3.4 0.0034 P8 GC+1d culture AGTGAACGCT 2.3 0.0023 P8 GC+SHH+1d culture TCTCTGAATG (2) 8.2 0.0082 P8 GC+SHH+1d culture AGTGAACGCT 1.2 0.0012 3T3 fibroblasts AGTGAACGCT 3.5 0.0035 E15 cortex AGTGAACGCT 4.9 0.0049 Hypothalamus TCTCTGAATG (2) 5.4 0.0054 Hypothalamus AGTGAACGCT 1.8 0.0018 Hypothalamus TTAAAGGTAA 1.8 0.0018 E12.5 retina TGTTACTTTT (2) 3.8 0.0038 E14.5 retina TCTCTGAATG (2) 5.5 0.0055 E16.5 retina TCTCTGAATG (2) 7.2 0.0072 E18.5 retina TCTCTGAATG (2) 9.1 0.0091 E18.5 retina TGTTACTTTT (2) 1.8 0.0018 P0.5 retina TCTCTGAATG (2) 5.9 0.0059 P0.5 retina TGTTACTTTT (2) 3.9 0.0039 P0.5 retina AGTGAACGCT 2 0.002 P2.5 retina TCTCTGAATG (2) 8.8 0.0088 P2.5 retina TGTTACTTTT (2) 1.8 0.0018 P4.5 retina TCTCTGAATG (2) 19.8 0.0198 P6.5 retina TCTCTGAATG (2) 30 0.03 P6.5 retina AGTGAACGCT 3.3 0.0033 P6.5 retina TGTTACTTTT (2) 1.7 0.0017 P6.5 retina TTAAAGGTAA 1.7 0.0017 P10.5 crx- retina TCTCTGAATG (2) 26 0.026 P10.5 crx+ retina TCTCTGAATG (2) 34.6 0.0346 P10.5 crx+ retina AGTGAACGCT 3.8 0.0038 P10.5 crx+ retina TGTTACTTTT (2) 1.9 0.0019 Adult retinal TCTCTGAATG (2) 70.4 0.0704 Adult retinal AGTGAACGCT 1.9 0.0019 Adult retinal TTAAAGGTAA 1.9 0.0019 ONL TCTCTGAATG (2) 59.4 0.0594