Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.178947	Becn1	beclin 1 (coiled-coil, myosin-like BCL2-interacting protein)	11		56208
Gene Ontology	autophagy | autophagy | cytoplasmic vesicle | cytoskeleton | defense response | Golgi trans face | membrane | protein binding | response to pest/pathogen/parasite
Human Homolog	BECN1[beclin 1 (coiled-coil, myosin-like BCL2 interacting protein)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 26 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CATCCTTTCC (3) GCGTACTCTG (3) TCGGGCCAGA (3) TGGTTTAATA 8.1 0.0081 Cb medulloblastoma CATCCTTTCC (3) TCGGGCCAGA (3) 4.6 0.0046 P8 GC+1d culture CATCCTTTCC (3) TCGGGCCAGA (3) 5.7 0.0057 P8 GC+SHH+1d culture CATCCTTTCC (3) 7 0.007 3T3 fibroblasts CATCCTTTCC (3) GCGTACTCTG (3) 14 0.014 E15 cortex CATCCTTTCC (3) GCGTACTCTG (3) TCGGGCCAGA (3) 14.7 0.0147 Hypothalamus CATCCTTTCC (3) 1.8 0.0018 E12.5 retina CATCCTTTCC (3) 7.5 0.0075 E14.5 retina CATCCTTTCC (3) GCGTACTCTG (3) 3.6 0.0036 E16.5 retina CATCCTTTCC (3) 1.8 0.0018 P0.5 retina CATCCTTTCC (3) 13.7 0.0137 P2.5 retina CATCCTTTCC (3) TGGTTTAATA 8.8 0.0088 P6.5 retina CATCCTTTCC (3) 5 0.005 P10.5 crx+ retina CATCCTTTCC (3) 7.7 0.0077 Adult retinal CATCCTTTCC (3) GCGTACTCTG (3) 7.5 0.0075