Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.17991	Cyp39a1	cytochrome P450, family 39, subfamily a, polypeptide 1	17		56050
Gene Ontology	bile acid biosynthesis | bile acid catabolism | cholesterol catabolism | electron transport | endoplasmic reticulum | membrane | microsome | monooxygenase activity | oxidoreductase activity | steroid 7-alpha-hydroxylase activity
Human Homolog	CYP39A1[cytochrome P450, family 39, subfamily A, polypeptide 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 34 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAACAATGGA (3) 11.4 0.0114 P8 GC+1d culture GAACAATGGA (3) 12.6 0.0126 P8 GC+1d culture AACAGTGGAT 3.4 0.0034 P8 GC+1d culture ACACTGGCTT (8) 1.1 0.0011 P8 GC+SHH+1d culture GAACAATGGA (3) 18.7 0.0187 3T3 fibroblasts GAACAATGGA (3) 3.5 0.0035 E15 cortex GAACAATGGA (3) 19.8 0.0198 P1 cortex GAACAATGGA (3) 4.5 0.0045 Hypothalamus GAACAATGGA (3) 14.5 0.0145 Hypothalamus AACAGTGGAT 1.8 0.0018 E12.5 retina GAACAATGGA (3) 41.3 0.0413 E12.5 retina AACAGTGGAT 5.6 0.0056 E12.5 retina ACACTGGCTT (8) 1.9 0.0019 E14.5 retina GAACAATGGA (3) 12.8 0.0128 E14.5 retina AACAGTGGAT 1.8 0.0018 E16.5 retina GAACAATGGA (3) 34.4 0.0344 E16.5 retina AACAGTGGAT 1.8 0.0018 E18.5 retina GAACAATGGA (3) 16.4 0.0164 E18.5 retina AACAGTGGAT 3.6 0.0036 P0.5 retina GAACAATGGA (3) 25.5 0.0255 P0.5 retina AACAGTGGAT 2 0.002 P0.5 retina ACACTGGCTT (8) 2 0.002 P2.5 retina GAACAATGGA (3) 8.8 0.0088 P4.5 retina GAACAATGGA (3) 9.9 0.0099 P4.5 retina ACACTGGCTT (8) 2 0.002 P6.5 retina GAACAATGGA (3) 10 0.01 P6.5 retina ACACTGGCTT (8) 1.7 0.0017 P10.5 crx- retina GAACAATGGA (3) 24.2 0.0242 P10.5 crx- retina ACACTGGCTT (8) 1.9 0.0019 P10.5 crx+ retina GAACAATGGA (3) 5.8 0.0058 Adult retinal GAACAATGGA (3) 5.6 0.0056 Adult retinal ACACTGGCTT (8) 1.9 0.0019 ONL GAACAATGGA (3) 3.8 0.0038 ONL ACACTGGCTT (8) 1.9 0.0019