| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAAAGGTTAA (2) AAAAGGTTGA AAAAGGTTGG TACTATGAGA
| 16.2 | 0.0162 |
| Cb medulloblastoma | AAAAGGTAAA (3) AAAAGGTTAA (2) AAAAGGTTGA
| 43.9 | 0.0439 |
| P8 GC+1d culture | AAAAGGTTAA (2) AAAAGGTTGA AAAAGGTTGG GGAAGTTTGG (3) TACTATGAGA
| 22.7 | 0.0227 |
| P8 GC+SHH+1d culture | AAAAGGTTAA (2) AAAAGGTTGA TACTATGAGA
| 23.5 | 0.0235 |
| 3T3 fibroblasts | GGAAGTTTGG (3) TACTATGAGA TCAGTCGCGG
| 24.5 | 0.0245 |
| P1 cortex | AAAAGGTTAA (2) TACTATGAGA
| 18.1 | 0.0181 |
| Hypothalamus | AAAAGGTTAA (2) AAAAGGTTGA AAAAGGTTGG ATGTTTCCGC GGAAGTTTGG (3) TACTATGAGA TCAGTCGCGG
| 37.9 | 0.0379 |
| E12.5 retina | AAAAGGTTAA (2) AAAAGGTTGA AAAAGGTTGG TACTATGAGA TCAGTCGCGG
| 16.9 | 0.0169 |
| E14.5 retina | AAAAGGTTAA (2) AAAAGGTTGA TCAGTCGCGG
| 10.9 | 0.0109 |
| E16.5 retina | AAAAGGTTAA (2) AAAAGGTTGA TACTATGAGA
| 7.2 | 0.0072 |
| E18.5 retina | AAAAGGTAAA (3) AAAAGGTTAA (2) AAAAGGTTGA AAAAGGTTGG TACTATGAGA
| 32.8 | 0.0328 |
| P0.5 retina | AAAAGGTAAA (3) AAAAGGTTAA (2) AAAAGGTTGA TACTATGAGA
| 21.6 | 0.0216 |
| P2.5 retina | AAAAGGTTAA (2) AAAAGGTTGA AAAAGGTTGG TACTATGAGA
| 10.6 | 0.0106 |
| P4.5 retina | AAAAGGTTGA TACTATGAGA
| 7.9 | 0.0079 |
| P6.5 retina | AAAAGGTAAA (3) AAAAGGTTAA (2) AAAAGGTTGA TACTATGAGA
| 16.7 | 0.0167 |
| P10.5 crx- retina | AAAAGGTTGA AAAAGGTTGG
| 5.6 | 0.0056 |
| P10.5 crx+ retina | AAAAGGTTGA
| 1.9 | 0.0019 |
| Adult retinal | AAAAGGTTGA TACTATGAGA
| 13 | 0.013 |
| ONL | AAAAGGTTGA TACTATGAGA
| 5.7 | 0.0057 |