Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.180191	Psmb8	proteosome (prosome, macropain) subunit, beta type 8 (large multifunctional protease 7)	17	17 18.61 cM	16913
Gene Ontology	cytosol | endopeptidase activity | hydrolase activity | immune response | peptidase activity | proteasome core complex (sensu Eukarya) | ubiquitin-dependent protein catabolism
Human Homolog	PSMB8[proteasome (prosome, macropain) subunit, beta type, 8 (large multifunctional protease 7)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 74 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TAAAAAAAAA (196) 47.3 0.0473 P8 Cb GC TCAAAAAAAA (60) 17.9 0.0179 P8 Cb GC GCCTGCTGTG (6) 6.5 0.0065 Cb medulloblastoma TAAAAAAAAA (196) 106.4 0.1064 Cb medulloblastoma TCAAAAAAAA (60) 99.4 0.0994 Cb medulloblastoma AGGAAGACGG 2.3 0.0023 Cb medulloblastoma GCCTGCTGTG (6) 2.3 0.0023 P8 GC+1d culture TAAAAAAAAA (196) 66.2 0.0662 P8 GC+1d culture TCAAAAAAAA (60) 17.1 0.0171 P8 GC+1d culture GCCTGCTGTG (6) 4.6 0.0046 P8 GC+1d culture AAGGAAGACG 3.4 0.0034 P8 GC+1d culture AAAGAAGACC (2) 1.1 0.0011 P8 GC+1d culture ATCTGTGGCT (4) 1.1 0.0011 P8 GC+1d culture ATGCTGCCAG (4) 1.1 0.0011 P8 GC+SHH+1d culture TAAAAAAAAA (196) 93.7 0.0937 P8 GC+SHH+1d culture TCAAAAAAAA (60) 51.5 0.0515 P8 GC+SHH+1d culture AAGGAAGACG 3.5 0.0035 P8 GC+SHH+1d culture GCCTGCTGTG (6) 3.5 0.0035 P8 GC+SHH+1d culture AAAGAAGACC (2) 1.2 0.0012 P8 GC+SHH+1d culture AGGAAGACGG 1.2 0.0012 P8 GC+SHH+1d culture ATGCTGCCAG (4) 1.2 0.0012 3T3 fibroblasts GCCTGCTGTG (6) 14 0.014 3T3 fibroblasts TAAAAAAAAA (196) 7 0.007 3T3 fibroblasts TCAAAAAAAA (60) 7 0.007 E15 cortex TCAAAAAAAA (60) 14.8 0.0148 E15 cortex TAAAAAAAAA (196) 9.9 0.0099 E15 cortex AGGAAGACGG 4.9 0.0049 P1 cortex TAAAAAAAAA (196) 50 0.05 P1 cortex TCAAAAAAAA (60) 22.7 0.0227 P1 cortex AGGAAGACGG 4.5 0.0045 P1 cortex ATCTGTGGCT (4) 4.5 0.0045 Hypothalamus TCAAAAAAAA (60) 39.8 0.0398 Hypothalamus TAAAAAAAAA (196) 32.6 0.0326 Hypothalamus TTGAAGAATC (3) 5.4 0.0054 E12.5 retina TAAAAAAAAA (196) 24.4 0.0244 E12.5 retina TCAAAAAAAA (60) 18.8 0.0188 E14.5 retina TAAAAAAAAA (196) 41.9 0.0419 E14.5 retina TCAAAAAAAA (60) 41.9 0.0419 E16.5 retina TAAAAAAAAA (196) 23.5 0.0235 E16.5 retina TCAAAAAAAA (60) 18.1 0.0181 E16.5 retina GTGGCACTGG (5) 3.6 0.0036 E16.5 retina TTGAAGAATC (3) 1.8 0.0018 E18.5 retina TAAAAAAAAA (196) 107.3 0.1073 E18.5 retina TCAAAAAAAA (60) 49.1 0.0491 E18.5 retina GCCTGCTGTG (6) 3.6 0.0036 E18.5 retina ATCTGTGGCT (4) 1.8 0.0018 E18.5 retina GTGGCACTGG (5) 1.8 0.0018 P0.5 retina TAAAAAAAAA (196) 37.3 0.0373 P0.5 retina TCAAAAAAAA (60) 31.4 0.0314 P0.5 retina GCCTGCTGTG (6) 2 0.002 P2.5 retina TAAAAAAAAA (196) 72.2 0.0722 P2.5 retina TCAAAAAAAA (60) 35.2 0.0352 P2.5 retina GCCTGCTGTG (6) 3.5 0.0035 P2.5 retina AAAGAAGACC (2) 1.8 0.0018 P2.5 retina ATGCTGCCAG (4) 1.8 0.0018 P4.5 retina TAAAAAAAAA (196) 122.8 0.1228 P4.5 retina TCAAAAAAAA (60) 37.6 0.0376 P4.5 retina GCCTGCTGTG (6) 4 0.004 P6.5 retina TAAAAAAAAA (196) 63.4 0.0634 P6.5 retina TCAAAAAAAA (60) 31.7 0.0317 P6.5 retina GCCTGCTGTG (6) 3.3 0.0033 P6.5 retina GTGGCACTGG (5) 1.7 0.0017 P10.5 crx- retina TCAAAAAAAA (60) 14.9 0.0149 P10.5 crx- retina TAAAAAAAAA (196) 9.3 0.0093 P10.5 crx- retina GCCTGCTGTG (6) 3.7 0.0037 P10.5 crx- retina ATCTGTGGCT (4) 1.9 0.0019 P10.5 crx+ retina TAAAAAAAAA (196) 25 0.025 P10.5 crx+ retina TCAAAAAAAA (60) 17.3 0.0173 Adult retinal TCAAAAAAAA (60) 20.4 0.0204 Adult retinal TAAAAAAAAA (196) 18.5 0.0185 Adult retinal GCCTGCTGTG (6) 1.9 0.0019 ONL TAAAAAAAAA (196) 28.7 0.0287 ONL TCAAAAAAAA (60) 15.3 0.0153 ONL GCCTGCTGTG (6) 1.9 0.0019