Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.180337	St13	suppression of tumorigenicity 13	15		70356
Gene Ontology	protein folding
Human Homolog	ST13[suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 115 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AATGAAATAA 6.5 0.0065 P8 Cb GC ACCCAATTAT (2) 3.3 0.0033 P8 Cb GC ACCTTGCCCT (2) 3.3 0.0033 P8 Cb GC GCCAAGTAAG (2) 1.6 0.0016 P8 Cb GC GTGGCTTTCC (4) 1.6 0.0016 P8 Cb GC TGAAAATATT (4) 1.6 0.0016 Cb medulloblastoma TAAGAAAAAA (12) 4.6 0.0046 Cb medulloblastoma ACCTTGCCCT (2) 2.3 0.0023 Cb medulloblastoma GAAGCCCTAA (2) 2.3 0.0023 P8 GC+1d culture ACCTTGCCCT (2) 13.7 0.0137 P8 GC+1d culture TGAAAATATT (4) 3.4 0.0034 P8 GC+1d culture AATGAAATAA 2.3 0.0023 P8 GC+1d culture GCCAAGTAAG (2) 2.3 0.0023 P8 GC+1d culture GTGGCAGGCA (5) 1.1 0.0011 P8 GC+SHH+1d culture AATGAAATAA 5.9 0.0059 P8 GC+SHH+1d culture ACCTTGCCCT (2) 4.7 0.0047 P8 GC+SHH+1d culture ACCCAATTAT (2) 3.5 0.0035 P8 GC+SHH+1d culture GGGGGGAAAG (8) 2.3 0.0023 P8 GC+SHH+1d culture GTGGCTTTCC (4) 2.3 0.0023 P8 GC+SHH+1d culture GAAGCCCTAA (2) 1.2 0.0012 P8 GC+SHH+1d culture GCCAAGTAAG (2) 1.2 0.0012 P8 GC+SHH+1d culture GTGGCAGGCA (5) 1.2 0.0012 3T3 fibroblasts ACCTTGCCCT (2) 35 0.035 3T3 fibroblasts GCCAAGTAAG (2) 14 0.014 3T3 fibroblasts GTCATAGCTG (590) 10.5 0.0105 3T3 fibroblasts AATGAAATAA 3.5 0.0035 3T3 fibroblasts GGGGGGAAAG (8) 3.5 0.0035 E15 cortex ACCTTGCCCT (2) 9.9 0.0099 E15 cortex GCCAAGTAAG (2) 9.9 0.0099 E15 cortex GGGGGGAAAG (8) 9.9 0.0099 E15 cortex GTCATAGCTG (590) 4.9 0.0049 P1 cortex GCCAAGTAAG (2) 13.6 0.0136 P1 cortex ACCTTGCCCT (2) 9.1 0.0091 P1 cortex AATGAAATAA 4.5 0.0045 P1 cortex CCAGGAAATG (2) 4.5 0.0045 Hypothalamus ACCTTGCCCT (2) 3.6 0.0036 Hypothalamus GCCAAGTAAG (2) 3.6 0.0036 Hypothalamus AATGAAATAA 1.8 0.0018 E12.5 retina ATGAATAAAT (5) 5.6 0.0056 E12.5 retina AATGAAATAA 3.8 0.0038 E12.5 retina GCCAAGTAAG (2) 3.8 0.0038 E12.5 retina GCTGAGAGAA (4) 3.8 0.0038 E12.5 retina GGGGGGAAAG (8) 1.9 0.0019 E14.5 retina AATGAAATAA 10.9 0.0109 E14.5 retina TGAAAATATT (4) 3.6 0.0036 E14.5 retina ACCTTGCCCT (2) 1.8 0.0018 E14.5 retina CCAGGAAATG (2) 1.8 0.0018 E14.5 retina CTGAGAGAAG (3) 1.8 0.0018 E14.5 retina GAAGCCCTAA (2) 1.8 0.0018 E14.5 retina GCCAAGTAAG (2) 1.8 0.0018 E14.5 retina GGGGGGAAAG (8) 1.8 0.0018 E14.5 retina GTGGCTTTCC (4) 1.8 0.0018 E14.5 retina TAAGAAAAAA (12) 1.8 0.0018 E16.5 retina AATGAAATAA 10.9 0.0109 E16.5 retina CGTTTAAAGC 5.4 0.0054 E16.5 retina ACCCAATTAT (2) 1.8 0.0018 E16.5 retina GTGGCAGGCA (5) 1.8 0.0018 E16.5 retina TAAGAAAAAA (12) 1.8 0.0018 E16.5 retina TGAAAATATT (4) 1.8 0.0018 E18.5 retina AATGAAATAA 14.6 0.0146 E18.5 retina TGAAAATATT (4) 5.5 0.0055 E18.5 retina GGGGGGAAAG (8) 3.6 0.0036 E18.5 retina ACCTTGCCCT (2) 1.8 0.0018 E18.5 retina GCCAAGTAAG (2) 1.8 0.0018 P0.5 retina ACCTTGCCCT (2) 7.9 0.0079 P0.5 retina GCTGAGAGAA (4) 5.9 0.0059 P0.5 retina GTCATAGCTG (590) 3.9 0.0039 P0.5 retina AATGAAATAA 2 0.002 P0.5 retina ACCCAATTAT (2) 2 0.002 P0.5 retina CTGAGAGAAG (3) 2 0.002 P0.5 retina GAAGCCCTAA (2) 2 0.002 P0.5 retina GCCAAGTAAG (2) 2 0.002 P2.5 retina ACCTTGCCCT (2) 8.8 0.0088 P2.5 retina GGGGCGAAAG 3.5 0.0035 P2.5 retina TGAAAATATT (4) 3.5 0.0035 P2.5 retina AATGAAATAA 1.8 0.0018 P2.5 retina ACCCAATTAT (2) 1.8 0.0018 P2.5 retina CTGAGAGAAG (3) 1.8 0.0018 P2.5 retina GGGGGGAAAG (8) 1.8 0.0018 P2.5 retina GTCATAGCTG (590) 1.8 0.0018 P2.5 retina GTGGCTTTCC (4) 1.8 0.0018 P4.5 retina AATGAAATAA 5.9 0.0059 P4.5 retina GGGGCGAAAG 4 0.004 P4.5 retina TGAAAATATT (4) 4 0.004 P4.5 retina GCTGAGAGAA (4) 2 0.002 P4.5 retina GTCATAGCTG (590) 2 0.002 P4.5 retina TAAGAAAAAA (12) 2 0.002 P6.5 retina AATGAAATAA 5 0.005 P6.5 retina ACCTTGCCCT (2) 3.3 0.0033 P6.5 retina GGGGGGAAAG (8) 3.3 0.0033 P6.5 retina GTCATAGCTG (590) 3.3 0.0033 P6.5 retina TGAAAATATT (4) 3.3 0.0033 P6.5 retina AAATCATTAA 1.7 0.0017 P6.5 retina CCAGGAAATG (2) 1.7 0.0017 P6.5 retina GCCAAGTAAG (2) 1.7 0.0017 P6.5 retina GGGGCGAAAG 1.7 0.0017 P10.5 crx- retina AATGAAATAA 5.6 0.0056 P10.5 crx- retina TGAAAATATT (4) 5.6 0.0056 P10.5 crx- retina GCCAAGTAAG (2) 3.7 0.0037 P10.5 crx+ retina ACCTTGCCCT (2) 3.8 0.0038 P10.5 crx+ retina TGAAAATATT (4) 3.8 0.0038 P10.5 crx+ retina AATGAAATAA 1.9 0.0019 P10.5 crx+ retina GCCAAGTAAG (2) 1.9 0.0019 P10.5 crx+ retina GGGGGGAAAG (8) 1.9 0.0019 Adult retinal ACCTTGCCCT (2) 5.6 0.0056 Adult retinal GCCAAGTAAG (2) 1.9 0.0019 Adult retinal GTCATAGCTG (590) 1.9 0.0019 ONL AATGAAATAA 9.6 0.0096 ONL ACCTTGCCCT (2) 7.7 0.0077 ONL AAATGGAAAG (4) 5.7 0.0057 ONL GTCATAGCTG (590) 5.7 0.0057 ONL AAATCATTAA 1.9 0.0019 ONL ACCCAATTAT (2) 1.9 0.0019 ONL GCCAAGTAAG (2) 1.9 0.0019 ONL GGGGCGAAAG 1.9 0.0019