Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.180458	Rpl13a	ribosomal protein L13a	7	7 69.0 cM	22121
Human Homolog	RPL13A[ribosomal protein L13a]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 231 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAAAAAAA (2) AGCTGGGGTT AGGCCGGGTG AGGTCGGGTG ATGTCGGGTG CAGCAGAAGC (3) CCTGACTGGC CCTGCCTTGG (2) CGCCAGACGC CGGTAGATGC (3) CTGCCCCACA TGGCTCAGGC (3) 355.4 0.3554 Cb medulloblastoma AAAAAAAAAA (2) AAGAAAAAGA AGCTGGGGTT AGGCCGGGTG AGGTCGGGTG CCTGCCTGGG CGCCAGACGC CTGCATCATT CTGTCCCACA GGGGATCTGT TGGCTCAGGC (3) 899.4 0.8994 P8 GC+1d culture AAAAAAAAAA (2) AGAGCATTAA (3) AGCTGGGGTT AGGCCGGGTG AGGTCGGGCG AGGTCGGGTG CCTGCCTTGG (2) CGGTAGATGC (3) TGGCTCAGGC (3) 358.4 0.3584 P8 GC+SHH+1d culture AAAAAAAAAA (2) AAGAAAAAGA AGAGCATTAA (3) AGAGGGGCAG AGCTGGGGTT AGGCAAACAG (2) AGGTCGGGTG CAGCAGAAGC (3) CCCAAAAAAA (2) CCTCGCACAG CCTGACTGGC CGCCAGACGC CGGTAGATGC (3) CTGCCCCACA TGGCTCAGGC (3) 433.3 0.4333 3T3 fibroblasts AAAAAAAAAA (2) AGAGGGGCAG AGCTGGGGTT AGGTCGGGTG ATGTCGGGTG CCTCGCACAG CCTGCCTGGG CGCCAGACGC CTGCCCCACA TGGCTCAGGC (3) 406.4 0.4064 E15 cortex AAAAAAAAAA (2) AGCTGGGGTT AGGTCGGGTG CAGCAGAAGC (3) CCCAAAAAAA (2) CCTGACTGGC CCTGCCTTGG (2) CGGTAGATGC (3) CTGCCCCACA TGGCTCAGGC (3) 514.3 0.5143 P1 cortex AAAAAAAAAA (2) AGCTGGGGTT AGGCAAACAG (2) AGGTCGGGTG CAGGTGGTGC (2) CCTGACTGGC 318 0.318 Hypothalamus AAAAAAAAAA (2) AGCTGGGGTT AGGCAAACAG (2) AGGTCGGGTG CAGCAGAAGC (3) CAGGTGGTGC (2) CCTCGCACAG CGCCAGACGC CGGTAGATGC (3) CTGCCCCACA CTGGCCAAAA GGGGATCTGT TGGCTCAGGC (3) TGGTTGGGTG (2) 217.2 0.2172 E12.5 retina AAAAAAAAAA (2) AGAGCATTAA (3) AGCTGGGGTT AGGTCGGGTG CAGGTGGTGC (2) CCTCGCACAG CCTGACTGGC CCTGCCTGGG CCTGCCTTGG (2) CGCCAGACGC CGGTAGATGC (3) CTGCCCCACA GGGGATCAGT 385.1 0.3851 E14.5 retina AAAAAAAAAA (2) AGCTGGGGTT AGGCAAACAG (2) AGGTCGGGTG AGTGTTTATT (3) CAGCAGAAGC (3) CAGGTGGTGC (2) CCTCGCACAG CCTGACTGGC CCTGCCTGGG CCTGCCTTGG (2) CGCCAGACGC CGGTAGATGC (3) CTGTCCCACA TGGCTCAGGC (3) TGGTTGGGTG (2) 207.5 0.2075 E16.5 retina AAAAAAAAAA (2) AGCTGGGGTT AGGCAAACAG (2) AGGTCGGGCG AGGTCGGGTG ATTACGCCAA CAGCAGAAGC (3) CCCAAAAAAA (2) CCTCGCACAG CCTGACTGGC CCTGCCTGGG CCTGCCTTGG (2) CGCCAGACGC CGGTAGATGC (3) GGATGAATCA TGGCTCAGGC (3) 204.5 0.2045 E18.5 retina AAAAAAAAAA (2) AGAGCATTAA (3) AGCTGGGGTT AGGCAAACAG (2) AGGTCGGGTG CAGCAGAAGC (3) CCCAAAAAAA (2) CCTCGCACAG CCTGACTGGC CGCCAGACGC CGGTAGATGC (3) CTGGCCAAAA TGGCTCAGGC (3) 494.5 0.4945 P0.5 retina AAAAAAAAAA (2) AGCTGGGGTT AGGCAAACAG (2) AGGTCGGGCG AGGTCGGGTG AGTGTTTATT (3) ATTACGCCAA CAGCAGAAGC (3) CCCAAAAAAA (2) CCTCGCACAG CCTGCCTGGG CCTGCCTTGG (2) CGCCAGACGC CGGTAGATGC (3) GGATGAATCA 375.2 0.3752 P2.5 retina AAAAAAAAAA (2) AAGAAAAAGA AGCTGGGGTT AGGTCGGGTG CAGCAGAAGC (3) CCCAAAAAAA (2) CCTCGCACAG CCTGACTGGC CCTGCCTTGG (2) CTGGCCAAAA CTGTCCCACA TGGCTCAGGC (3) 473.6 0.4736 P4.5 retina AAAAAAAAAA (2) AGCTGGGGTT AGGCAAACAG (2) AGGTCGGGTG AGTGTTTATT (3) CCCAAAAAAA (2) CCTCGCACAG CGCCAGACGC TGGCTCAGGC (3) 358.7 0.3587 P6.5 retina AAAAAAAAAA (2) AGCTGGGGTT AGGCCGGGTG AGGTCGGGTG CAGGTGGTGC (2) CCCAAAAAAA (2) CCTCGCACAG CCTGCCTTGG (2) CGCCAGACGC TGGCTCAGGC (3) 380.2 0.3802 P10.5 crx- retina AAAAAAAAAA (2) AGCTGGGGTT AGGCAAACAG (2) AGGTCGGGTG CCTCGCACAG CCTGACTGGC CGGTAGATGC (3) CTGCATCATT CTGCCCCACA GGGGATCAGT TGGCTCAGGC (3) 239.7 0.2397 P10.5 crx+ retina AAAAAAAAAA (2) AGCTGGGGTT AGGTCGGGTG CCTCGCACAG CCTGACTGGC CTGTCCCACA GGATGAATCA GGGGATCAGT 211.3 0.2113 Adult retinal AAAAAAAAAA (2) AGCTGGGGTT AGGTCGGGTG ATGAACACTG (9) ATGTCGGGTG ATTACGCCAA CAGGTGGTGC (2) CCCAAAAAAA (2) CCTCGCACAG CCTGACTGGC CCTGCCTGGG CCTGCCTTGG (2) 198.4 0.1984 ONL AAAAAAAAAA (2) AGCTGGGGTT AGGCAAACAG (2) AGGCCGGGTG AGGTCGGGTG ATGAACACTG (9) CCCAAAAAAA (2) CCTGCCTGGG TGGTTGGGTG (2) 187.5 0.1875