Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.181290	Mrpl49	mitochondrial ribosomal protein L49	19	19 3.0 cM	18120
Gene Ontology	intracellular | mitochondrion | protein biosynthesis | ribosome | structural constituent of ribosome
Human Homolog	MRPL49[mitochondrial ribosomal protein L49]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 48 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TCCAACCCAC (3) 4.9 0.0049 P8 Cb GC TCTTACTGGC (3) 1.6 0.0016 Cb medulloblastoma TCCAACCCAC (3) 4.6 0.0046 P8 GC+1d culture TCCAACCCAC (3) 6.8 0.0068 P8 GC+1d culture TGGCAGGCGT (2) 2.3 0.0023 P8 GC+1d culture TCTTACTGGC (3) 1.1 0.0011 P8 GC+SHH+1d culture TCCAACCCAC (3) 7 0.007 P8 GC+SHH+1d culture TCTTACTGGC (3) 3.5 0.0035 P8 GC+SHH+1d culture CCTTGCCCCT (5) 1.2 0.0012 P8 GC+SHH+1d culture GGAGGCCATA 1.2 0.0012 3T3 fibroblasts TCCAACCCAC (3) 3.5 0.0035 P1 cortex TCCAACCCAC (3) 4.5 0.0045 Hypothalamus TCCAACCCAC (3) 3.6 0.0036 Hypothalamus CCTTGCCCCT (5) 1.8 0.0018 Hypothalamus GACGGGAGTG 1.8 0.0018 E12.5 retina TCCAACCCAC (3) 7.5 0.0075 E12.5 retina TCTTACTGGC (3) 1.9 0.0019 E14.5 retina TCCAACCCAC (3) 7.3 0.0073 E14.5 retina GACGGGAGTG 1.8 0.0018 E16.5 retina TCCAACCCAC (3) 12.7 0.0127 E16.5 retina TGGCAGGCGT (2) 5.4 0.0054 E16.5 retina CCTTGCCCCT (5) 1.8 0.0018 E16.5 retina GGAGGCCATA 1.8 0.0018 E18.5 retina TCCAACCCAC (3) 7.3 0.0073 E18.5 retina GACGGGAGTG 1.8 0.0018 E18.5 retina GGAGGCCATA 1.8 0.0018 P0.5 retina GTTGTCTTCC (4) 2 0.002 P0.5 retina TCCAACCCAC (3) 2 0.002 P2.5 retina TCCAACCCAC (3) 3.5 0.0035 P2.5 retina TCTTACTGGC (3) 1.8 0.0018 P2.5 retina TGGCAGGCGT (2) 1.8 0.0018 P4.5 retina TCCAACCCAC (3) 7.9 0.0079 P6.5 retina TCCAACCCAC (3) 11.7 0.0117 P6.5 retina GTTGTCTTCC (4) 1.7 0.0017 P10.5 crx- retina TCCAACCCAC (3) 7.4 0.0074 P10.5 crx- retina TCTTACTGGC (3) 3.7 0.0037 P10.5 crx- retina GACGGGAGTG 1.9 0.0019 P10.5 crx- retina TGGCAGGCGT (2) 1.9 0.0019 P10.5 crx+ retina TCCAACCCAC (3) 13.5 0.0135 P10.5 crx+ retina TCTTACTGGC (3) 1.9 0.0019 Adult retinal TCCAACCCAC (3) 7.4 0.0074 Adult retinal GACGGGAGTG 1.9 0.0019 Adult retinal TCTTACTGGC (3) 1.9 0.0019 Adult retinal TGGCAGGCGT (2) 1.9 0.0019 ONL TCCAACCCAC (3) 17.2 0.0172 ONL GACGGGAGTG 1.9 0.0019 ONL GTTGTCTTCC (4) 1.9 0.0019 ONL TCTTACTGGC (3) 1.9 0.0019