Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.181430	9930018I23Rik	RIKEN cDNA 9930018I23 gene	12		319904
Mm.181430	Dnchc1	dynein, cytoplasmic, heavy chain 1	12	12 55.0 cM	13424
Gene Ontology	ATP binding | cysteine-type endopeptidase activity | cytoplasmic dynein complex | dynein complex | microtubule motor activity | microtubule-based movement | motor activity | nucleotide binding | proteolysis and peptidolysis
Human Homolog	DNCH1[dynein, cytoplasmic, heavy polypeptide 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 119 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAAAAAAA (658) 203.9 0.2039 P8 Cb GC ACGGGCAAAA (2) 14.7 0.0147 P8 Cb GC GTGGCGCACA (11) 8.2 0.0082 P8 Cb GC ACGGGAAAAA (6) 6.5 0.0065 P8 Cb GC GCTGGGCTCC (5) 6.5 0.0065 P8 Cb GC ACGGGCTCCC (2) 4.9 0.0049 P8 Cb GC ATTTCTCTTT (2) 3.3 0.0033 Cb medulloblastoma AAAAAAAAAA (658) 797.8 0.7978 Cb medulloblastoma ACGGGCAAAA (2) 32.4 0.0324 Cb medulloblastoma ACGGGAAAAA (6) 4.6 0.0046 Cb medulloblastoma GCTGGGCTCC (5) 2.3 0.0023 P8 GC+1d culture AAAAAAAAAA (658) 204.3 0.2043 P8 GC+1d culture ACGGGCAAAA (2) 14.8 0.0148 P8 GC+1d culture GCTGGGCTCC (5) 3.4 0.0034 P8 GC+1d culture GTGGCGCACA (11) 3.4 0.0034 P8 GC+1d culture ACGGGAAAAA (6) 2.3 0.0023 P8 GC+1d culture ATTTCTCTTT (2) 1.1 0.0011 P8 GC+1d culture CTTAGTGTTT (4) 1.1 0.0011 P8 GC+SHH+1d culture AAAAAAAAAA (658) 278.7 0.2787 P8 GC+SHH+1d culture ACGGGCAAAA (2) 12.9 0.0129 P8 GC+SHH+1d culture ACGGGAAAAA (6) 3.5 0.0035 P8 GC+SHH+1d culture GCTGGGCTCC (5) 3.5 0.0035 P8 GC+SHH+1d culture GTGGCGCACA (11) 3.5 0.0035 P8 GC+SHH+1d culture ACGGGCTCCC (2) 1.2 0.0012 P8 GC+SHH+1d culture CTTAGTGTTT (4) 1.2 0.0012 P8 GC+SHH+1d culture TGCTGAGGAT (3) 1.2 0.0012 3T3 fibroblasts AAAAAAAAAA (658) 28 0.028 3T3 fibroblasts GTGGCGCACA (11) 28 0.028 3T3 fibroblasts GCTGGGCTCC (5) 3.5 0.0035 E15 cortex AAAAAAAAAA (658) 212.8 0.2128 E15 cortex GTGGCGCACA (11) 44.5 0.0445 E15 cortex ACGGGCAAAA (2) 39.6 0.0396 E15 cortex ACGGGCTCCC (2) 9.9 0.0099 E15 cortex CTTAGTGTTT (4) 4.9 0.0049 P1 cortex AAAAAAAAAA (658) 245.4 0.2454 P1 cortex ACGGGCAAAA (2) 18.2 0.0182 P1 cortex ACGGGAAAAA (6) 9.1 0.0091 P1 cortex GTGGCGCACA (11) 4.5 0.0045 Hypothalamus AAAAAAAAAA (658) 123.2 0.1232 Hypothalamus ACGGGCAAAA (2) 29 0.029 Hypothalamus ACGGGAAAAA (6) 5.4 0.0054 Hypothalamus ACGGGCTCCC (2) 3.6 0.0036 Hypothalamus GTGGCGCACA (11) 3.6 0.0036 Hypothalamus CAGTGAAGAA (4) 1.8 0.0018 Hypothalamus CTTAGTGTTT (4) 1.8 0.0018 E12.5 retina AAAAAAAAAA (658) 138.9 0.1389 E12.5 retina ACGGGCAAAA (2) 7.5 0.0075 E12.5 retina ACGGGAAAAA (6) 3.8 0.0038 E12.5 retina GTGGCGCACA (11) 3.8 0.0038 E12.5 retina ATTTCTCTTT (2) 1.9 0.0019 E12.5 retina GCTGGGCTCC (5) 1.9 0.0019 E14.5 retina AAAAAAAAAA (658) 94.7 0.0947 E14.5 retina GTGGCGCACA (11) 10.9 0.0109 E14.5 retina ACGGGCAAAA (2) 9.1 0.0091 E14.5 retina ACGGGAAAAA (6) 1.8 0.0018 E14.5 retina ACGGGCTCCC (2) 1.8 0.0018 E14.5 retina CAGTGAAGAA (4) 1.8 0.0018 E14.5 retina CTTAGTGTTT (4) 1.8 0.0018 E14.5 retina GCTGGGCTCC (5) 1.8 0.0018 E16.5 retina AAAAAAAAAA (658) 43.5 0.0435 E16.5 retina ACGGGCAAAA (2) 10.9 0.0109 E16.5 retina GTGGCGCACA (11) 9.1 0.0091 E16.5 retina ACGGGCTCCC (2) 1.8 0.0018 E16.5 retina CTTAGTGTTT (4) 1.8 0.0018 E18.5 retina AAAAAAAAAA (658) 374.7 0.3747 E18.5 retina ACGGGCAAAA (2) 32.7 0.0327 E18.5 retina GTGGCGCACA (11) 5.5 0.0055 E18.5 retina ACGGGAAAAA (6) 1.8 0.0018 E18.5 retina ACGGGCTCCC (2) 1.8 0.0018 E18.5 retina GCTGGGCTCC (5) 1.8 0.0018 E18.5 retina TACAGCTACA (5) 1.8 0.0018 E18.5 retina TGCTGAGGAT (3) 1.8 0.0018 P0.5 retina AAAAAAAAAA (658) 117.8 0.1178 P0.5 retina ACGGGAAAAA (6) 5.9 0.0059 P0.5 retina GTGGCGCACA (11) 5.9 0.0059 P0.5 retina ACGGGCAAAA (2) 2 0.002 P2.5 retina AAAAAAAAAA (658) 329.1 0.3291 P2.5 retina ACGGGCAAAA (2) 15.8 0.0158 P2.5 retina GTGGCGCACA (11) 7 0.007 P2.5 retina ACGGGAAAAA (6) 3.5 0.0035 P2.5 retina TGCTGAGGAT (3) 1.8 0.0018 P4.5 retina AAAAAAAAAA (658) 283.3 0.2833 P4.5 retina ACGGGCAAAA (2) 15.9 0.0159 P4.5 retina ACGGGAAAAA (6) 9.9 0.0099 P4.5 retina GTGGCGCACA (11) 7.9 0.0079 P6.5 retina AAAAAAAAAA (658) 266.8 0.2668 P6.5 retina ACGGGCAAAA (2) 30 0.03 P6.5 retina GTGGCGCACA (11) 11.7 0.0117 P6.5 retina ACGGGAAAAA (6) 8.3 0.0083 P6.5 retina GCTGGGCTCC (5) 3.3 0.0033 P6.5 retina ACGGGCTCCC (2) 1.7 0.0017 P6.5 retina CTTAGTGTTT (4) 1.7 0.0017 P6.5 retina TACAGCTACA (5) 1.7 0.0017 P10.5 crx- retina AAAAAAAAAA (658) 44.6 0.0446 P10.5 crx- retina ACGGGCAAAA (2) 11.1 0.0111 P10.5 crx- retina GCTGGGCTCC (5) 5.6 0.0056 P10.5 crx- retina GTGGCGCACA (11) 5.6 0.0056 P10.5 crx- retina ACGGGAAAAA (6) 1.9 0.0019 P10.5 crx- retina GAGATCAACC (2) 1.9 0.0019 P10.5 crx- retina TACAGCTACA (5) 1.9 0.0019 P10.5 crx+ retina AAAAAAAAAA (658) 96.1 0.0961 P10.5 crx+ retina ACGGGCAAAA (2) 26.9 0.0269 P10.5 crx+ retina GTGGCGCACA (11) 11.5 0.0115 P10.5 crx+ retina ACGGGAAAAA (6) 5.8 0.0058 P10.5 crx+ retina CAGTGAAGAA (4) 5.8 0.0058 P10.5 crx+ retina GAGATCAACC (2) 3.8 0.0038 P10.5 crx+ retina GCTGGGCTCC (5) 3.8 0.0038 P10.5 crx+ retina ACGGGCTCCC (2) 1.9 0.0019 Adult retinal AAAAAAAAAA (658) 57.4 0.0574 Adult retinal GTGGCGCACA (11) 22.2 0.0222 Adult retinal ACGGGCAAAA (2) 13 0.013 Adult retinal GCTGGGCTCC (5) 7.4 0.0074 Adult retinal ACGGGCTCCC (2) 3.7 0.0037 Adult retinal TACAGCTACA (5) 1.9 0.0019 ONL AAAAAAAAAA (658) 103.4 0.1034 ONL GTGGCGCACA (11) 13.4 0.0134 ONL ACGGGCAAAA (2) 5.7 0.0057 ONL ACGGGAAAAA (6) 3.8 0.0038 ONL CTTAGTGTTT (4) 1.9 0.0019