Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.181485	B830007D08Rik	RIKEN cDNA B830007D08 gene	9		77850
Mm.181485	D230010O13Rik	RIKEN cDNA D230010O13 gene	9		319390
Mm.181485	6330586M15Rik	RIKEN cDNA 6330586M15 gene	9		319225
Mm.181485	Nck1	non-catalytic region of tyrosine kinase adaptor protein 1	9		17973
Gene Ontology	actin filament organization | cell migration | kinase activity | lamellipodium biogenesis | protein binding | receptor activity | vesicle membrane
Human Homolog	NCK1[NCK adaptor protein 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 48 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TCAGTAATTT (6) 8.2 0.0082 P8 Cb GC AGTATTTTTG (5) 1.6 0.0016 P8 Cb GC GTTTGCCTGA (9) 1.6 0.0016 Cb medulloblastoma TCAGTAATTT (6) 4.6 0.0046 Cb medulloblastoma AGTATTTTTG (5) 2.3 0.0023 P8 GC+1d culture TCAGTAATTT (6) 13.7 0.0137 P8 GC+1d culture GTTTGCCTGA (9) 2.3 0.0023 P8 GC+1d culture AATAAACACA (7) 1.1 0.0011 P8 GC+SHH+1d culture TCAGTAATTT (6) 8.2 0.0082 P8 GC+SHH+1d culture AATAAACACA (7) 3.5 0.0035 3T3 fibroblasts GTTTGCCTGA (9) 10.5 0.0105 E15 cortex GTTTGCCTGA (9) 9.9 0.0099 E15 cortex AATAAAACAG (4) 4.9 0.0049 P1 cortex AAATAAAAAC (10) 4.5 0.0045 P1 cortex GTTTGCCTGA (9) 4.5 0.0045 Hypothalamus TCAGTAATTT (6) 16.3 0.0163 Hypothalamus AATAAACACA (7) 3.6 0.0036 E12.5 retina TCAGTAATTT (6) 3.8 0.0038 E12.5 retina AAATAAAAAC (10) 1.9 0.0019 E12.5 retina AATAAACACA (7) 1.9 0.0019 E14.5 retina TCAGTAATTT (6) 18.2 0.0182 E14.5 retina GTTTGCCTGA (9) 3.6 0.0036 E14.5 retina AGTATTTTTG (5) 1.8 0.0018 E16.5 retina TCAGTAATTT (6) 16.3 0.0163 E16.5 retina CAGAAGCAGG (6) 1.8 0.0018 E18.5 retina TCAGTAATTT (6) 3.6 0.0036 E18.5 retina AATAAAACAG (4) 1.8 0.0018 E18.5 retina GTTTGCCTGA (9) 1.8 0.0018 P0.5 retina TCAGTAATTT (6) 3.9 0.0039 P0.5 retina GTTTGCCTGA (9) 2 0.002 P2.5 retina TCAGTAATTT (6) 12.3 0.0123 P2.5 retina AAATAAAAAC (10) 1.8 0.0018 P2.5 retina GTTTGCCTGA (9) 1.8 0.0018 P4.5 retina TCAGTAATTT (6) 7.9 0.0079 P4.5 retina GTTTGCCTGA (9) 2 0.002 P6.5 retina TCAGTAATTT (6) 10 0.01 P6.5 retina AATAAACACA (7) 1.7 0.0017 P10.5 crx- retina TCAGTAATTT (6) 16.7 0.0167 P10.5 crx- retina GTTTGCCTGA (9) 1.9 0.0019 P10.5 crx+ retina TCAGTAATTT (6) 7.7 0.0077 P10.5 crx+ retina GTTTGCCTGA (9) 3.8 0.0038 P10.5 crx+ retina AAATAAAAAC (10) 1.9 0.0019 P10.5 crx+ retina AATAAACACA (7) 1.9 0.0019 Adult retinal TCAGTAATTT (6) 3.7 0.0037 Adult retinal AATAAAACAG (4) 1.9 0.0019 Adult retinal CAGAAGCAGG (6) 1.9 0.0019 ONL CAGAAGCAGG (6) 1.9 0.0019 ONL TCAGTAATTT (6) 1.9 0.0019