Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.183137	Krt2-1	keratin complex 2, basic, gene 1	15	15 58.81 cM	16678
Gene Ontology	cytoskeleton organization and biogenesis | intermediate filament | structural constituent of cytoskeleton | structural molecule activity
Human Homolog	KRT1[keratin 1 (epidermolytic hyperkeratosis)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 44 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GGATTTGGCT (3) 323 0.323 P8 Cb GC GAGACAGTGT (6) 3.3 0.0033 P8 Cb GC ATGTCTTGAG (3) 1.6 0.0016 P8 Cb GC CATTTAAAAA (6) 1.6 0.0016 Cb medulloblastoma GGATTTGGCT (3) 115.6 0.1156 Cb medulloblastoma GAGACAGTGT (6) 2.3 0.0023 P8 GC+1d culture GGATTTGGCT (3) 208.9 0.2089 P8 GC+1d culture CACCCAGCTC (3) 1.1 0.0011 P8 GC+1d culture CATTTAAAAA (6) 1.1 0.0011 P8 GC+1d culture CCCAGAGCAC (4) 1.1 0.0011 P8 GC+SHH+1d culture GGATTTGGCT (3) 258.8 0.2588 P8 GC+SHH+1d culture ATGTCTTGAG (3) 1.2 0.0012 3T3 fibroblasts GGATTTGGCT (3) 87.6 0.0876 3T3 fibroblasts CACCCAGCTC (3) 7 0.007 E15 cortex GGATTTGGCT (3) 118.7 0.1187 P1 cortex GGATTTGGCT (3) 77.3 0.0773 Hypothalamus GGATTTGGCT (3) 146.7 0.1467 Hypothalamus ACCAAGTTGA (3) 3.6 0.0036 Hypothalamus CATTTAAAAA (6) 1.8 0.0018 Hypothalamus CCCAGAGCAC (4) 1.8 0.0018 E12.5 retina GGATTTGGCT (3) 446.8 0.4468 E14.5 retina GGATTTGGCT (3) 400.8 0.4008 E16.5 retina GGATTTGGCT (3) 460 0.46 E16.5 retina GAGACAGTGT (6) 1.8 0.0018 E18.5 retina GGATTTGGCT (3) 569.3 0.5693 E18.5 retina CACCCAGCTC (3) 1.8 0.0018 P0.5 retina GGATTTGGCT (3) 300.3 0.3003 P2.5 retina GGATTTGGCT (3) 304.4 0.3044 P2.5 retina CACCCAGCTC (3) 3.5 0.0035 P2.5 retina CATTTAAAAA (6) 1.8 0.0018 P4.5 retina GGATTTGGCT (3) 261.5 0.2615 P4.5 retina CATTTAAAAA (6) 2 0.002 P6.5 retina GGATTTGGCT (3) 203.4 0.2034 P10.5 crx- retina GGATTTGGCT (3) 187.6 0.1876 P10.5 crx+ retina GGATTTGGCT (3) 163.4 0.1634 P10.5 crx+ retina CACCCAGCTC (3) 1.9 0.0019 P10.5 crx+ retina CCCAGAGCAC (4) 1.9 0.0019 Adult retinal GGATTTGGCT (3) 68.5 0.0685 Adult retinal ACCAAGTTGA (3) 1.9 0.0019 Adult retinal ATGTCTTGAG (3) 1.9 0.0019 Adult retinal CACCCAGCTC (3) 1.9 0.0019 ONL GGATTTGGCT (3) 74.7 0.0747 ONL ACCAAGTTGA (3) 1.9 0.0019 ONL CATTTAAAAA (6) 1.9 0.0019