Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.1838	Vamp8	vesicle-associated membrane protein 8	6	6 31.5 cM	22320
Gene Ontology	early endosome | integral to membrane
Human Homolog	VAMP8[vesicle-associated membrane protein 8 (endobrevin)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 54 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GCTGGCAGCC (4) 50.6 0.0506 P8 Cb GC GGGCCCCTGA (2) 1.6 0.0016 Cb medulloblastoma GCTGGCAGCC (4) 83.2 0.0832 Cb medulloblastoma GGGCCCCTGA (2) 6.9 0.0069 Cb medulloblastoma GTCCTGAGAG (3) 4.6 0.0046 P8 GC+1d culture GCTGGCAGCC (4) 79.9 0.0799 P8 GC+1d culture GTCCTGAGAG (3) 6.8 0.0068 P8 GC+1d culture GGGCCCCTGA (2) 5.7 0.0057 P8 GC+SHH+1d culture GCTGGCAGCC (4) 100.7 0.1007 P8 GC+SHH+1d culture GGGCCCCTGA (2) 3.5 0.0035 P8 GC+SHH+1d culture GTCCTGAGAG (3) 2.3 0.0023 3T3 fibroblasts GCTGGCAGCC (4) 56.1 0.0561 3T3 fibroblasts GTCCTGAGAG (3) 14 0.014 E15 cortex GCTGGCAGCC (4) 54.4 0.0544 E15 cortex GGGCCCCTGA (2) 9.9 0.0099 P1 cortex GCTGGCAGCC (4) 18.2 0.0182 P1 cortex GGGCCCCTGA (2) 4.5 0.0045 Hypothalamus GCTGGCAGCC (4) 27.2 0.0272 Hypothalamus GGGCCCCTGA (2) 7.2 0.0072 Hypothalamus GTCCTGAGAG (3) 7.2 0.0072 E12.5 retina GCTGGCAGCC (4) 58.2 0.0582 E12.5 retina GGGCCCCTGA (2) 3.8 0.0038 E12.5 retina GTCCTGAGAG (3) 1.9 0.0019 E14.5 retina GCTGGCAGCC (4) 67.4 0.0674 E16.5 retina GCTGGCAGCC (4) 70.6 0.0706 E16.5 retina GGGCCCCTGA (2) 1.8 0.0018 E16.5 retina GTCCTGAGAG (3) 1.8 0.0018 E18.5 retina GCTGGCAGCC (4) 105.5 0.1055 E18.5 retina GTCCTGAGAG (3) 3.6 0.0036 P0.5 retina GCTGGCAGCC (4) 56.9 0.0569 P0.5 retina CTACCACTCC 2 0.002 P0.5 retina GGGCCCCTGA (2) 2 0.002 P0.5 retina GTCCTGAGAG (3) 2 0.002 P2.5 retina GCTGGCAGCC (4) 58.1 0.0581 P2.5 retina CTACCACTCC 1.8 0.0018 P2.5 retina GTCCTGAGAG (3) 1.8 0.0018 P4.5 retina GCTGGCAGCC (4) 67.4 0.0674 P4.5 retina GTCCTGAGAG (3) 2 0.002 P6.5 retina GCTGGCAGCC (4) 46.7 0.0467 P6.5 retina CTACCACTCC 1.7 0.0017 P6.5 retina GGGCCCCTGA (2) 1.7 0.0017 P6.5 retina GTCCTGAGAG (3) 1.7 0.0017 P10.5 crx- retina GCTGGCAGCC (4) 66.9 0.0669 P10.5 crx- retina GTCCTGAGAG (3) 3.7 0.0037 P10.5 crx- retina CTACCACTCC 1.9 0.0019 P10.5 crx- retina GGGCCCCTGA (2) 1.9 0.0019 P10.5 crx+ retina GCTGGCAGCC (4) 69.2 0.0692 P10.5 crx+ retina GTCCTGAGAG (3) 5.8 0.0058 P10.5 crx+ retina CTACCACTCC 1.9 0.0019 Adult retinal GCTGGCAGCC (4) 20.4 0.0204 Adult retinal GTCCTGAGAG (3) 3.7 0.0037 Adult retinal GGGCCCCTGA (2) 1.9 0.0019 ONL GCTGGCAGCC (4) 5.7 0.0057 ONL GTCCTGAGAG (3) 3.8 0.0038