Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.184012	Trim9	tripartite motif protein 9	12		94090
Gene Ontology	cytoplasm | intracellular | protein binding | protein binding | protein ubiquitination | synaptic vesicle exocytosis | synaptosome | ubiquitin ligase complex | ubiquitin-protein ligase activity | zinc ion binding
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 37 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATGAATAAAG (2) 3.3 0.0033 P8 Cb GC ACAGTGCAAT (2) 1.6 0.0016 P8 Cb GC GCTGGGCCGC 1.6 0.0016 Cb medulloblastoma GCTGGGCCGC 16.2 0.0162 Cb medulloblastoma ACAGTGCAAT (2) 2.3 0.0023 P8 GC+1d culture ACAGTGCAAT (2) 2.3 0.0023 P8 GC+SHH+1d culture ACAGTGCAAT (2) 2.3 0.0023 P8 GC+SHH+1d culture ATGAATAAAG (2) 2.3 0.0023 E15 cortex GCTGGGCCGC 14.8 0.0148 P1 cortex ACAGTGCAAT (2) 4.5 0.0045 P1 cortex GCTGGGCCGC 4.5 0.0045 Hypothalamus ACAGTGCAAT (2) 3.6 0.0036 Hypothalamus GCTGGGCCGC 3.6 0.0036 E12.5 retina GAAGAGATGG (2) 5.6 0.0056 E12.5 retina ACAGTGCAAT (2) 1.9 0.0019 E14.5 retina ACAGTGCAAT (2) 3.6 0.0036 E14.5 retina ATGAATAAAG (2) 1.8 0.0018 E14.5 retina GATTCTCATT (2) 1.8 0.0018 E16.5 retina ACAGTGCAAT (2) 5.4 0.0054 E18.5 retina ATGAATAAAG (2) 5.5 0.0055 E18.5 retina ACAGTGCAAT (2) 3.6 0.0036 E18.5 retina GCTGGGCCGC 3.6 0.0036 P0.5 retina TTTTGGTGAC 3.9 0.0039 P0.5 retina GCTGGGCCGC 2 0.002 P2.5 retina ATGAATAAAG (2) 1.8 0.0018 P2.5 retina GCTGGGCCGC 1.8 0.0018 P4.5 retina GCTGGGCCGC 11.9 0.0119 P4.5 retina ACAGTGCAAT (2) 4 0.004 P4.5 retina ATGAATAAAG (2) 2 0.002 P6.5 retina GCTGGGCCGC 3.3 0.0033 P10.5 crx- retina GCTGGGCCGC 9.3 0.0093 P10.5 crx- retina GATTCTCATT (2) 3.7 0.0037 P10.5 crx+ retina GCTGGGCCGC 7.7 0.0077 P10.5 crx+ retina ACAGTGCAAT (2) 1.9 0.0019 Adult retinal GCTGGGCCGC 3.7 0.0037 ONL ACAGTGCAAT (2) 9.6 0.0096 ONL TTTTGGTGAC 1.9 0.0019