Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.184163	Raf1	v-raf-1 leukemia viral oncogene 1	6	6 52.5 cM	110157
Gene Ontology	ATP binding | cell growth and/or maintenance | cytosol | diacylglycerol binding | intracellular | intracellular signaling cascade | kinase activity | plasma membrane | protein amino acid phosphorylation | protein binding | protein kinase activity | protein kinase cascade | protein serine/threonine kinase activity | receptor signaling protein activity | regulation of cell cycle | signal transduction | transferase activity
Human Homolog	RAF1[v-raf-1 murine leukemia viral oncogene homolog 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 117 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAGTCCTGGC (3) AGACCCTGTC (2) GAAAAATATT (3) GAGTCCTGGC (2) TGGACAGCAG (2) TTCAGGGCGG 16.2 0.0162 Cb medulloblastoma AACTGCAGAG (2) AAGTCCTGGC (3) ACCAAGGACA AGACCCTGTC (2) TTCAGGGCGG 48.5 0.0485 P8 GC+1d culture AACTGCAGAG (2) AAGTCCTGGC (3) AGACCCTGTC (2) ATCCAAAAAA (3) GAAAAATATT (3) GAGTCCTGGC (2) TTCAGGGCGG 34.2 0.0342 P8 GC+SHH+1d culture AACTGCAGAG (2) AAGTCCTGGC (3) ACCAAGGACA AGACCCTGTC (2) ATCCAAAAAA (3) GAAAAATATT (3) GAGTCCTGGC (2) TGCAAAACTG TTCAGGGCGG 24.7 0.0247 3T3 fibroblasts AAGTCCTGGC (3) GAGTCCTGGC (2) TTCAGGGCGG 24.5 0.0245 E15 cortex AACTGCAGAG (2) AGACCCTGTC (2) GAGTCCTGGC (2) TTCAGGGCGG 34.5 0.0345 P1 cortex AACTGCAGAG (2) AGACCCTGTC (2) GAAAAATATT (3) GAGTCCTGGC (2) TTCAGGGCGG 45.4 0.0454 Hypothalamus AACTGCAGAG (2) AAGTCCTGGC (3) ACCAAGGACA AGACCCTGTC (2) ATCCAAAAAA (3) GAAAAATATT (3) GAGTCCTGGC (2) TTCAGGGCGG 32.5 0.0325 E12.5 retina AACTGCAGAG (2) AGACCCTGTC (2) ATCCAAAAAA (3) GAAAAATATT (3) GAGTCCTGGC (2) TTCAGGGCGG 22.6 0.0226 E14.5 retina AACTGCAGAG (2) AGACCCTGTC (2) GAAAAATATT (3) TTCAGGGCGG 21.9 0.0219 E16.5 retina AACTGCAGAG (2) ACCAAGGACA AGACCCTGTC (2) ATTACGCCAA GAAAAATATT (3) GAGTCCTGGC (2) TTCAGGGCGG 25.3 0.0253 E18.5 retina AACTGCAGAG (2) AGACCCTGTC (2) ATCCAAAAAA (3) GAAAAATATT (3) GAGTCCTGGC (2) TGCAAAACTG TTCAGGGCGG 32.6 0.0326 P0.5 retina AACTGCAGAG (2) AAGTCCTGGC (3) AGACCCTGTC (2) ATTACGCCAA GAAAAATATT (3) GAGTCCTGGC (2) TGGACAGCAG (2) TTCAGGGCGG 45.3 0.0453 P2.5 retina AACTGCAGAG (2) AGACCCTGTC (2) ATCCAAAAAA (3) GAAAAATATT (3) GAGTCCTGGC (2) TGCAAAACTG TTCAGGGCGG 47.5 0.0475 P4.5 retina AACTGCAGAG (2) AAGTCCTGGC (3) AGACCCTGTC (2) ATCCAAAAAA (3) GAAAAATATT (3) TTCAGGGCGG 53.5 0.0535 P6.5 retina AACTGCAGAG (2) AGACCCTGTC (2) GAAAAATATT (3) GAGTCCTGGC (2) TGGACAGCAG (2) TTCAGGGCGG 75.2 0.0752 P10.5 crx- retina AACTGCAGAG (2) AAGTCCTGGC (3) AGACCCTGTC (2) GAAAAATATT (3) GAGTCCTGGC (2) TTCAGGGCGG 57.6 0.0576 P10.5 crx+ retina AACTGCAGAG (2) AAGTCCTGGC (3) AGACCCTGTC (2) GAAAAATATT (3) TTCAGGGCGG 61.4 0.0614 Adult retinal AGACCCTGTC (2) ATTACGCCAA GAGTCCTGGC (2) TTCAGGGCGG 57.5 0.0575 ONL AACTGCAGAG (2) AGACCCTGTC (2) GAAAAATATT (3) TTCAGGGCGG 38.2 0.0382