Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.18472	Psmc6	proteasome (prosome, macropain) 26S subunit, ATPase, 6	14		67089
Gene Ontology	ATP binding | ATPase activity | cytoplasm | cytosol | hydrolase activity | nucleotide binding | nucleus | proteasome complex (sensu Eukarya) | protein catabolism
Human Homolog	PSMC6[proteasome (prosome, macropain) 26S subunit, ATPase, 6]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 108 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AACAGACTTT (3) ACAGACATTG TATAAGCAAA TATAAGCAAC TGGCAATCAA TTTGGTGATG 27.8 0.0278 Cb medulloblastoma AACAGACTTT (3) ACAGACATTG TAATTTTCCA TATAAGCAAC TGGCAATCAA TTTGGTGATG 23.1 0.0231 P8 GC+1d culture ACAGACATTT (3) TATAAGCAAC TCTCACAAGG TGGCAATCAA TTTGGTGATG 26.3 0.0263 P8 GC+SHH+1d culture ACAGACATTG GTCCAGCACA TAGCTCAATG TATAAGCAAA TATAAGCAAC TCTCACAAGG TGGCAATCAA TTTGGTGATG 18.8 0.0188 3T3 fibroblasts TGGCAATCAA 3.5 0.0035 E15 cortex ACAGACATTG TGGCAATCAA 14.8 0.0148 P1 cortex AACAGACTTT (3) TAATTTTCCA TGGCAATCAA 18.1 0.0181 Hypothalamus AACAGACTTT (3) ACAGACATTT (3) GCGGACCCTA (2) TAATTTTCCA TATAAGCAAA TATAAGCAAC TGGCAATCAA 61.4 0.0614 E12.5 retina ACAGACATTT (3) TATAAGCAAA TATAAGCAAC TGGCAATCAA TTTGGTGATG 20.7 0.0207 E14.5 retina AACAGACTTT (3) ACAGACATTG ACAGACATTT (3) TATAAGCAAA TATAAGCAAC TGGCAATCAA TTTGGTGATG 25.4 0.0254 E16.5 retina AACAGACTTT (3) ACAGACATTG ACAGACATTT (3) TATAAGCAAA TATAAGCAAC TCTCACAAGG TGGCAATCAA TTTGGTGATG 25.2 0.0252 E18.5 retina ACAGACATTT (3) TATAAGCAAA TATAAGCAAC TCTCACAAGG TGGCAATCAA TTTGGTGATG 40 0.04 P0.5 retina TAATTTTCCA TATAAGCAAA TCTCACAAGG TGGCAATCAA TTTGGTGATG 15.7 0.0157 P2.5 retina ACAGACATTG TATAAGCAAA TATAAGCAAC TGGCAATCAA TTTGGTGATG 22.8 0.0228 P4.5 retina TAATTTTCCA TATAAGCAAA TATAAGCAAC TGGCAATCAA TTTGGTGATG 23.8 0.0238 P6.5 retina AACAGACTTT (3) TATAAGCAAC TCTCACAAGG TGGCAATCAA TTTGGTGATG 21.6 0.0216 P10.5 crx- retina AACAGACTTT (3) GCGGACCCTA (2) TAATTTTCCA TATAAGCAAC TCTCACAAGG TTTGGTGATG 16.8 0.0168 P10.5 crx+ retina AACAGACTTT (3) TAATTTTCCA TAGCTCAATG TATAAGCAAA TCTCACAAGG TGGCAATCAA TTTGGTGATG 24.9 0.0249 Adult retinal ACAGACATTG GTCCAGCACA TAATTTTCCA TAGCTCAATG TATAAGCAAA TCTCACAAGG TGGCAATCAA TTTGGTGATG 22.5 0.0225 ONL TATAAGCAAC TCTCACAAGG TTTGGTGATG 9.5 0.0095