Mouse Retina SAGE Library    [Home]    [Libraries]    [Images]

Gene:              Accession:    
e.g., Rho or Rhodopsin e.g., BG297543 batch search
Tag:        Cytoband (Mm):    
e.g., CCCAGTTCAC e.g., 6 E3
Unigene:        Cytoband (Hs):    
e.g., Mm.2965 batch search e.g., 3q21-q24


 UniGene  Symbol  Name  Chr  Cytoband  LocusLink 
 Mm.18516 H3f3bH3 histone, family 3B 11  11 E2  15081 
 Gene Ontology chromosome | DNA binding | nucleosome | nucleus
 Human Homolog H3F3B[H3 histone, family 3B (H3.3B)]
 Clusters 
   Neighbors    

Total 5 In Situ Hybridization Images

Images -- Click to Enlarge



SAGE Tags

Total 297 tags found with positive counts.

  all tags    reliable tags    sum by library with all tags    sum by library with reliable tags  
 Library  Tag (Other Genes)  Normalized Count  % in library 
P8 Cb GCGGAGTAAGAA71.80.0718
P8 Cb GCTTTCTGTATG47.30.0473
P8 Cb GCGTTGTCTTTG (2)13.10.0131
P8 Cb GCTTTATAAACT (3)11.40.0114
P8 Cb GCAAAAGCAAAA (2)9.80.0098
P8 Cb GCAAAAGCAAGA (4)9.80.0098
P8 Cb GCCCCAAAGACA (5)8.20.0082
P8 Cb GCGCCTCCTGGG (10)4.90.0049
P8 Cb GCGGTCACACTA (4)4.90.0049
P8 Cb GCTTTCTTGTTT (7)4.90.0049
P8 Cb GCAAAATACAAA (3)1.60.0016
P8 Cb GCAATCAAGAAA (2)1.60.0016
P8 Cb GCATGGTGACTC (3)1.60.0016
P8 Cb GCCCCAAGGACA (15)1.60.0016
P8 Cb GCGGAAGAGGGA (5)1.60.0016
P8 Cb GCGTTTATTAAA (7)1.60.0016
P8 Cb GCTGGTAGAATG1.60.0016
P8 Cb GCTTCACTAACC1.60.0016
P8 Cb GCTTCTGGTGGT (6)1.60.0016
P8 Cb GCTTTAATTCAC (3)1.60.0016
Cb medulloblastomaGGAGTAAGAA41.60.0416
Cb medulloblastomaGTTGTCTTTG (2)25.40.0254
Cb medulloblastomaAAAAGCAAAA (2)9.20.0092
Cb medulloblastomaGGTCACACTA (4)6.90.0069
Cb medulloblastomaTTTCTGTATG6.90.0069
Cb medulloblastomaTTTATAAACT (3)4.60.0046
Cb medulloblastomaAAAATACAAA (3)2.30.0023
Cb medulloblastomaGAATTTGGGG2.30.0023
Cb medulloblastomaGTTTATTAAA (7)2.30.0023
Cb medulloblastomaTGTCTGTATG2.30.0023
P8 GC+1d cultureGGAGTAAGAA107.30.1073
P8 GC+1d cultureTTTCTGTATG74.20.0742
P8 GC+1d cultureGTTGTCTTTG (2)160.016
P8 GC+1d cultureAAAAGCAAGA (4)10.30.0103
P8 GC+1d cultureGCCTCCTGGG (10)9.10.0091
P8 GC+1d cultureCCCAAAGACA (5)80.008
P8 GC+1d cultureGGTCACACTA (4)80.008
P8 GC+1d cultureAAAATACAAA (3)6.80.0068
P8 GC+1d cultureTTTATAAACT (3)4.60.0046
P8 GC+1d cultureTGGTAGAATG3.40.0034
P8 GC+1d cultureGTTTATTAAA (7)2.30.0023
P8 GC+1d cultureTTAATTAAGT (5)2.30.0023
P8 GC+1d cultureTTTCTTGTTT (7)2.30.0023
P8 GC+1d cultureAAAAGCAAAA (2)1.10.0011
P8 GC+1d cultureATGGTGACTC (3)1.10.0011
P8 GC+1d cultureGGAGTAAGGA (2)1.10.0011
P8 GC+SHH+1d cultureGGAGTAAGAA106.60.1066
P8 GC+SHH+1d cultureGTTGTCTTTG (2)43.30.0433
P8 GC+SHH+1d cultureTTTCTGTATG340.034
P8 GC+SHH+1d cultureTTTATAAACT (3)12.90.0129
P8 GC+SHH+1d cultureGGTCACACTA (4)9.40.0094
P8 GC+SHH+1d cultureGCCTCCTGGG (10)8.20.0082
P8 GC+SHH+1d cultureGTTTATTAAA (7)8.20.0082
P8 GC+SHH+1d cultureCCCAAAGACA (5)5.90.0059
P8 GC+SHH+1d cultureAAAATACAAA (3)3.50.0035
P8 GC+SHH+1d cultureCCCAAGGACA (15)3.50.0035
P8 GC+SHH+1d cultureAAAAGCAAAA (2)2.30.0023
P8 GC+SHH+1d cultureAAAAGCAAGA (4)2.30.0023
P8 GC+SHH+1d cultureATGGTGACTC (3)2.30.0023
P8 GC+SHH+1d cultureTTCACTAACC2.30.0023
P8 GC+SHH+1d cultureAAAAGGAAAA (3)1.20.0012
P8 GC+SHH+1d cultureGAATTTGGGG1.20.0012
P8 GC+SHH+1d cultureGGAGTAAGGA (2)1.20.0012
P8 GC+SHH+1d cultureGGCTCCCCAG (4)1.20.0012
P8 GC+SHH+1d cultureGTTTCTGCAT (2)1.20.0012
P8 GC+SHH+1d cultureGTTTTAGAAT (3)1.20.0012
P8 GC+SHH+1d cultureTGGTAGAATG1.20.0012
P8 GC+SHH+1d cultureTTAATTAAGT (5)1.20.0012
P8 GC+SHH+1d cultureTTCCTGTATG1.20.0012
P8 GC+SHH+1d cultureTTCTGGTGGT (6)1.20.0012
P8 GC+SHH+1d cultureTTTTTAATAT1.20.0012
3T3 fibroblastsGGTCACACTA (4)10.50.0105
3T3 fibroblastsGTCATAGCTG (590)10.50.0105
3T3 fibroblastsCCCAAGGACA (15)70.007
3T3 fibroblastsGGAGTAAGAA70.007
3T3 fibroblastsATGGTGACTC (3)3.50.0035
3T3 fibroblastsGCCTCCTGGG (10)3.50.0035
3T3 fibroblastsTTTCTGTATG3.50.0035
E15 cortexGAATTTGGGG4.90.0049
E15 cortexGCCTCCTGGG (10)4.90.0049
E15 cortexGCTGCCCTTA4.90.0049
E15 cortexGGAGTAAGAA4.90.0049
E15 cortexGTCATAGCTG (590)4.90.0049
P1 cortexTTTCTGTATG18.20.0182
P1 cortexGGAGTAAGAA13.60.0136
P1 cortexGTTGTCTTTG (2)13.60.0136
P1 cortexGGAAGAGGGA (5)9.10.0091
P1 cortexGGTCACACTA (4)9.10.0091
P1 cortexAAAAGCAAGA (4)4.50.0045
P1 cortexGCTGCCCTTA4.50.0045
P1 cortexTGGTAGAATG4.50.0045
P1 cortexTTTCTTGTTT (7)4.50.0045
HypothalamusGTTGTCTTTG (2)12.70.0127
HypothalamusGGAGTAAGAA9.10.0091
HypothalamusGTTTATTAAA (7)5.40.0054
HypothalamusTTTCTGTATG5.40.0054
HypothalamusAAAAGCAAGA (4)3.60.0036
HypothalamusAAAATACAAA (3)3.60.0036
HypothalamusTTTATAAACT (3)3.60.0036
HypothalamusTTTTTGTATG3.60.0036
HypothalamusGGTCACACTA (4)1.80.0018
HypothalamusTTCACTAACC1.80.0018
HypothalamusTTCTGGTGGT (6)1.80.0018
E12.5 retinaGTTGTCTTTG (2)52.60.0526
E12.5 retinaGGAGTAAGAA35.70.0357
E12.5 retinaTTTCTGTATG22.50.0225
E12.5 retinaATGATGAGGA (2)13.10.0131
E12.5 retinaGCCTCCTGGG (10)11.30.0113
E12.5 retinaAAAAGCAAGA (4)9.40.0094
E12.5 retinaCCCAAAGACA (5)7.50.0075
E12.5 retinaTTTATAAACT (3)5.60.0056
E12.5 retinaGGAAGAGGGA (5)3.80.0038
E12.5 retinaAAAAGCAAAA (2)1.90.0019
E12.5 retinaATGGTGACTC (3)1.90.0019
E12.5 retinaCCCAAGGACA (15)1.90.0019
E12.5 retinaGGTCACACTA (4)1.90.0019
E12.5 retinaGTTTATTAAA (7)1.90.0019
E12.5 retinaGTTTTAGAAT (3)1.90.0019
E12.5 retinaTGGTAGAATG1.90.0019
E12.5 retinaTTAATTAAGT (5)1.90.0019
E14.5 retinaGGAGTAAGAA56.50.0565
E14.5 retinaGTTGTCTTTG (2)34.60.0346
E14.5 retinaTTTCTGTATG12.80.0128
E14.5 retinaGCCTCCTGGG (10)10.90.0109
E14.5 retinaTTTCTTGTTT (7)9.10.0091
E14.5 retinaATGGTGACTC (3)5.50.0055
E14.5 retinaCCCAAAGACA (5)5.50.0055
E14.5 retinaAAAAGCAAGA (4)3.60.0036
E14.5 retinaTTAATTAAGT (5)3.60.0036
E14.5 retinaTTTATAAACT (3)3.60.0036
E14.5 retinaAAAAGGAAAA (3)1.80.0018
E14.5 retinaCCCAAGGACA (15)1.80.0018
E14.5 retinaGAATTTGGGG1.80.0018
E14.5 retinaGGAAGAGGGA (5)1.80.0018
E14.5 retinaGTTTATTAAA (7)1.80.0018
E14.5 retinaTTCACTAACC1.80.0018
E14.5 retinaTTTAATTCAC (3)1.80.0018
E16.5 retinaGGAGTAAGAA94.20.0942
E16.5 retinaGTTGTCTTTG (2)34.40.0344
E16.5 retinaTTTCTGTATG25.40.0254
E16.5 retinaTTTATAAACT (3)10.90.0109
E16.5 retinaAAAAGCAAGA (4)9.10.0091
E16.5 retinaCCCAAAGACA (5)7.20.0072
E16.5 retinaGCCTCCTGGG (10)7.20.0072
E16.5 retinaATGGTGACTC (3)5.40.0054
E16.5 retinaGGAAGAGGGA (5)5.40.0054
E16.5 retinaGTTTATTAAA (7)3.60.0036
E16.5 retinaAATCAAGAAA (2)1.80.0018
E16.5 retinaGGAGTAAGAC1.80.0018
E16.5 retinaGGTCACACTA (4)1.80.0018
E16.5 retinaGTTTTAGAAT (3)1.80.0018
E16.5 retinaTTTAATTCAC (3)1.80.0018
E16.5 retinaTTTCTTGTTT (7)1.80.0018
E18.5 retinaGGAGTAAGAA400.04
E18.5 retinaTTTCTGTATG30.90.0309
E18.5 retinaGTTGTCTTTG (2)27.30.0273
E18.5 retinaTTAATTAAGT (5)7.30.0073
E18.5 retinaTTTATAAACT (3)7.30.0073
E18.5 retinaAAAAGCAAGA (4)3.60.0036
E18.5 retinaCCCAAGGACA (15)3.60.0036
E18.5 retinaGGAAGAGGGA (5)3.60.0036
E18.5 retinaGTTTATTAAA (7)3.60.0036
E18.5 retinaGTTTTAGAAT (3)3.60.0036
E18.5 retinaATGATGAGGA (2)1.80.0018
E18.5 retinaATGGTGACTC (3)1.80.0018
E18.5 retinaGGAGTAAGAC1.80.0018
E18.5 retinaGGCTCCCCAG (4)1.80.0018
E18.5 retinaTGTCTGTATG1.80.0018
E18.5 retinaTTTCTTGTTT (7)1.80.0018
P0.5 retinaGGAGTAAGAA113.80.1138
P0.5 retinaTTTCTGTATG66.70.0667
P0.5 retinaGGTCACACTA (4)17.70.0177
P0.5 retinaGTTGTCTTTG (2)17.70.0177
P0.5 retinaTTTATAAACT (3)17.70.0177
P0.5 retinaAAAAGCAAGA (4)11.80.0118
P0.5 retinaATGGTGACTC (3)3.90.0039
P0.5 retinaCCCAAAGACA (5)3.90.0039
P0.5 retinaGCCTCCTGGG (10)3.90.0039
P0.5 retinaGGAGTAAGGA (2)3.90.0039
P0.5 retinaGTCATAGCTG (590)3.90.0039
P0.5 retinaTTCCTGTATG3.90.0039
P0.5 retinaAAAAGCAAAA (2)20.002
P0.5 retinaAATCAAGAAA (2)20.002
P0.5 retinaATGATGAGGA (2)20.002
P0.5 retinaGGCTCCCCAG (4)20.002
P0.5 retinaGTTTATTAAA (7)20.002
P0.5 retinaGTTTTAGAAT (3)20.002
P0.5 retinaTGTCTGTATG20.002
P0.5 retinaTTAATTAAGT (5)20.002
P0.5 retinaTTTCTTGTTT (7)20.002
P0.5 retinaTTTTTGTATG20.002
P2.5 retinaGGAGTAAGAA100.30.1003
P2.5 retinaTTTCTGTATG510.051
P2.5 retinaGTTGTCTTTG (2)31.70.0317
P2.5 retinaAAAAGCAAGA (4)14.10.0141
P2.5 retinaGGTCACACTA (4)70.007
P2.5 retinaTTTATAAACT (3)70.007
P2.5 retinaGTTTATTAAA (7)3.50.0035
P2.5 retinaTTTCTTGTTT (7)3.50.0035
P2.5 retinaCCCAAAGACA (5)1.80.0018
P2.5 retinaCCCAAGGACA (15)1.80.0018
P2.5 retinaGCCTCCTGGG (10)1.80.0018
P2.5 retinaGCTGCCCTTA1.80.0018
P2.5 retinaGGAAGAGGGA (5)1.80.0018
P2.5 retinaGTCATAGCTG (590)1.80.0018
P2.5 retinaTGGTAGAATG1.80.0018
P2.5 retinaTTAATTAAGT (5)1.80.0018
P2.5 retinaTTCACTAACC1.80.0018
P2.5 retinaTTTTTAATAT1.80.0018
P4.5 retinaGGAGTAAGAA73.30.0733
P4.5 retinaGTTGTCTTTG (2)27.70.0277
P4.5 retinaTTTCTGTATG23.80.0238
P4.5 retinaGTTTATTAAA (7)7.90.0079
P4.5 retinaCCCAAGGACA (15)5.90.0059
P4.5 retinaGGAAGAGGGA (5)40.004
P4.5 retinaTTTATAAACT (3)40.004
P4.5 retinaAAAAGCAAGA (4)20.002
P4.5 retinaAAAATACAAA (3)20.002
P4.5 retinaCCCAAAGACA (5)20.002
P4.5 retinaGGAGTAAGAC20.002
P4.5 retinaGTCATAGCTG (590)20.002
P4.5 retinaGTTTCTGCAT (2)20.002
P4.5 retinaTGGTAGAATG20.002
P4.5 retinaTTAATTAAGT (5)20.002
P4.5 retinaTTTTTAATAT20.002
P6.5 retinaGGAGTAAGAA118.40.1184
P6.5 retinaTTTCTGTATG66.70.0667
P6.5 retinaGTTGTCTTTG (2)26.70.0267
P6.5 retinaTTTATAAACT (3)16.70.0167
P6.5 retinaAAAAGCAAGA (4)13.30.0133
P6.5 retinaATGGTGACTC (3)50.005
P6.5 retinaCCCAAAGACA (5)50.005
P6.5 retinaGCCTCCTGGG (10)50.005
P6.5 retinaTTCACTAACC50.005
P6.5 retinaGGTCACACTA (4)3.30.0033
P6.5 retinaGTCATAGCTG (590)3.30.0033
P6.5 retinaTGGTAGAATG3.30.0033
P6.5 retinaTTTCTTGTTT (7)3.30.0033
P6.5 retinaGAATTTGGGG1.70.0017
P6.5 retinaGCTGCCCTTA1.70.0017
P6.5 retinaGGAAGAGGGA (5)1.70.0017
P10.5 crx- retinaGGAGTAAGAA169.10.1691
P10.5 crx- retinaTTTCTGTATG40.90.0409
P10.5 crx- retinaGGTCACACTA (4)14.90.0149
P10.5 crx- retinaGTTGTCTTTG (2)130.013
P10.5 crx- retinaGCCTCCTGGG (10)11.10.0111
P10.5 crx- retinaCCCAAAGACA (5)7.40.0074
P10.5 crx- retinaAAAAGCAAGA (4)5.60.0056
P10.5 crx- retinaTTTATAAACT (3)5.60.0056
P10.5 crx- retinaCACAAAGACA (4)1.90.0019
P10.5 crx- retinaGGAGTAAGAC1.90.0019
P10.5 crx- retinaGTTTATTAAA (7)1.90.0019
P10.5 crx- retinaTGGTAGAATG1.90.0019
P10.5 crx- retinaTTTCTTGTTT (7)1.90.0019
P10.5 crx+ retinaGGAGTAAGAA61.50.0615
P10.5 crx+ retinaTTTCTGTATG21.10.0211
P10.5 crx+ retinaGTTGTCTTTG (2)17.30.0173
P10.5 crx+ retinaTTTATAAACT (3)17.30.0173
P10.5 crx+ retinaCCCAAAGACA (5)9.60.0096
P10.5 crx+ retinaGCCTCCTGGG (10)5.80.0058
P10.5 crx+ retinaGGTCACACTA (4)5.80.0058
P10.5 crx+ retinaAAAAGCAAGA (4)3.80.0038
P10.5 crx+ retinaAAAATACAAA (3)1.90.0019
P10.5 crx+ retinaCACAAAGACA (4)1.90.0019
P10.5 crx+ retinaGGAAGAGGGA (5)1.90.0019
P10.5 crx+ retinaGGCTCCCCAG (4)1.90.0019
P10.5 crx+ retinaTGGTAGAATG1.90.0019
Adult retinalGGAGTAAGAA38.90.0389
Adult retinalTTTCTGTATG27.80.0278
Adult retinalGGTCACACTA (4)16.70.0167
Adult retinalGTTGTCTTTG (2)130.013
Adult retinalAAAAGCAAGA (4)5.60.0056
Adult retinalGCCTCCTGGG (10)5.60.0056
Adult retinalCCCAAAGACA (5)3.70.0037
Adult retinalATGGTGACTC (3)1.90.0019
Adult retinalCACAAAGACA (4)1.90.0019
Adult retinalCCCAAGGACA (15)1.90.0019
Adult retinalGAATTTGGGG1.90.0019
Adult retinalGGAGTAAGAC1.90.0019
Adult retinalGTCATAGCTG (590)1.90.0019
Adult retinalTGGTAGAATG1.90.0019
ONLTTTCTGTATG36.40.0364
ONLGGAGTAAGAA30.60.0306
ONLTTTATAAACT (3)9.60.0096
ONLAAAAGCAAGA (4)7.70.0077
ONLGTTGTCTTTG (2)7.70.0077
ONLGGTCACACTA (4)5.70.0057
ONLGTCATAGCTG (590)5.70.0057
ONLTTCACTAACC3.80.0038
ONLAAAAGGAAAA (3)1.90.0019
ONLCACAAAGACA (4)1.90.0019
ONLCCCAAAGACA (5)1.90.0019
ONLGCCTCCTGGG (10)1.90.0019
ONLGTTTCTGCAT (2)1.90.0019
ONLTTCCTGTATG1.90.0019
ONLTTCTGGTGGT (6)1.90.0019
ONLTTTCTTGTTT (7)1.90.0019