Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.18516	H3f3b	H3 histone, family 3B	11	11 E2	15081
Gene Ontology	chromosome | DNA binding | nucleosome | nucleus
Human Homolog	H3F3B[H3 histone, family 3B (H3.3B)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 5 In Situ Hybridization Images

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SAGE Tags

Total 160 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAGCAAAA AAAAGCAAGA (2) ATGGTGACTC CCCAAAGACA GGAGTAAGAA TGGTAGAATG TTCACTAACC TTTATAAACT (2) TTTCTGTATG TTTCTTGTTT (2) 168 0.168 Cb medulloblastoma AAAAGCAAAA GGAGTAAGAA TGTCTGTATG TTTATAAACT (2) TTTCTGTATG 64.6 0.0646 P8 GC+1d culture AAAAGCAAAA AAAAGCAAGA (2) ATGGTGACTC CCCAAAGACA GGAGTAAGAA GGAGTAAGGA (2) TGGTAGAATG TTTATAAACT (2) TTTCTGTATG TTTCTTGTTT (2) 213.4 0.2134 P8 GC+SHH+1d culture AAAAGCAAAA AAAAGCAAGA (2) ATGGTGACTC CCCAAAGACA GGAGTAAGAA GGAGTAAGGA (2) GTTTCTGCAT (2) GTTTTAGAAT TGGTAGAATG TTCACTAACC TTCCTGTATG TTTATAAACT (2) TTTCTGTATG 174.6 0.1746 3T3 fibroblasts ATGGTGACTC GGAGTAAGAA TTTCTGTATG 14 0.014 E15 cortex GCTGCCCTTA GGAGTAAGAA 9.8 0.0098 P1 cortex AAAAGCAAGA (2) GCTGCCCTTA GGAGTAAGAA TGGTAGAATG TTTCTGTATG TTTCTTGTTT (2) 49.8 0.0498 Hypothalamus AAAAGCAAGA (2) GGAGTAAGAA TTCACTAACC TTTATAAACT (2) TTTCTGTATG TTTTTGTATG 27.1 0.0271 E12.5 retina AAAAGCAAAA AAAAGCAAGA (2) ATGGTGACTC CCCAAAGACA GGAGTAAGAA GTTTTAGAAT TGGTAGAATG TTTATAAACT (2) TTTCTGTATG 88.3 0.0883 E14.5 retina AAAAGCAAGA (2) ATGGTGACTC CCCAAAGACA GGAGTAAGAA TTCACTAACC TTTATAAACT (2) TTTCTGTATG TTTCTTGTTT (2) 98.4 0.0984 E16.5 retina AAAAGCAAGA (2) ATGGTGACTC CCCAAAGACA GGAGTAAGAA GGAGTAAGAC GTTTTAGAAT TTTATAAACT (2) TTTCTGTATG TTTCTTGTTT (2) 157.6 0.1576 E18.5 retina AAAAGCAAGA (2) ATGGTGACTC GGAGTAAGAA GGAGTAAGAC GTTTTAGAAT TGTCTGTATG TTTATAAACT (2) TTTCTGTATG TTTCTTGTTT (2) 92.6 0.0926 P0.5 retina AAAAGCAAAA AAAAGCAAGA (2) ATGGTGACTC CCCAAAGACA GGAGTAAGAA GGAGTAAGGA (2) GTTTTAGAAT TGTCTGTATG TTCCTGTATG TTTATAAACT (2) TTTCTGTATG TTTCTTGTTT (2) TTTTTGTATG 235.6 0.2356 P2.5 retina AAAAGCAAGA (2) CCCAAAGACA GCTGCCCTTA GGAGTAAGAA TGGTAGAATG TTCACTAACC TTTATAAACT (2) TTTCTGTATG TTTCTTGTTT (2) 183.1 0.1831 P4.5 retina AAAAGCAAGA (2) CCCAAAGACA GGAGTAAGAA GGAGTAAGAC GTTTCTGCAT (2) TGGTAGAATG TTTATAAACT (2) TTTCTGTATG 111.1 0.1111 P6.5 retina AAAAGCAAGA (2) ATGGTGACTC CCCAAAGACA GCTGCCCTTA GGAGTAAGAA TGGTAGAATG TTCACTAACC TTTATAAACT (2) TTTCTGTATG TTTCTTGTTT (2) 238.4 0.2384 P10.5 crx- retina AAAAGCAAGA (2) CCCAAAGACA GGAGTAAGAA GGAGTAAGAC TGGTAGAATG TTTATAAACT (2) TTTCTGTATG TTTCTTGTTT (2) 234.3 0.2343 P10.5 crx+ retina AAAAGCAAGA (2) CCCAAAGACA GGAGTAAGAA TGGTAGAATG TTTATAAACT (2) TTTCTGTATG 115.2 0.1152 Adult retinal AAAAGCAAGA (2) ATGGTGACTC CCCAAAGACA GGAGTAAGAA GGAGTAAGAC TGGTAGAATG TTTCTGTATG 81.7 0.0817 ONL AAAAGCAAGA (2) CCCAAAGACA GGAGTAAGAA GTTTCTGCAT (2) TTCACTAACC TTCCTGTATG TTTATAAACT (2) TTTCTGTATG TTTCTTGTTT (2) 95.7 0.0957