Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.185355
Gm253
gene model 253, (NCBI)
11
11 E2
217304
Human Homolog
TREM5[triggering receptor expressed on myeloid cells 5]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
Total 4 In Situ Hybridization Images
Images -- Click to Enlarge
SAGE Tags
Total 23 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AACTCTGCCT (
5
)
3.3
0.0033
Cb medulloblastoma
GAGATGCTCA
(
4
)
2.3
0.0023
P8 GC+SHH+1d culture
GAGATGCTCA
(
4
)
1.2
0.0012
3T3 fibroblasts
AACTCTGCCT (
5
)
3.5
0.0035
E15 cortex
CCTCCAGTCT (
2
)
9.9
0.0099
P1 cortex
CCTCCAGTCT (
2
)
9.1
0.0091
P1 cortex
GAGATGCTCA
(
4
)
4.5
0.0045
Hypothalamus
GAGATGCTCA
(
4
)
1.8
0.0018
E12.5 retina
AACTCTGCCT (
5
)
1.9
0.0019
E12.5 retina
CCTCCAGTCT (
2
)
1.9
0.0019
E14.5 retina
CCTCCAGTCT (
2
)
3.6
0.0036
E16.5 retina
AACTCTGCCT (
5
)
3.6
0.0036
E16.5 retina
CCTCCAGTCT (
2
)
1.8
0.0018
E18.5 retina
CCTCCAGTCT (
2
)
1.8
0.0018
P0.5 retina
AACTCTGCCT (
5
)
3.9
0.0039
P0.5 retina
CCTCCAGTCT (
2
)
3.9
0.0039
P0.5 retina
GAGATGCTCA
(
4
)
3.9
0.0039
P2.5 retina
AACTCTGCCT (
5
)
1.8
0.0018
P4.5 retina
CCTCCAGTCT (
2
)
2
0.002
P6.5 retina
CCTCCAGTCT (
2
)
3.3
0.0033
P10.5 crx- retina
CCTCCAGTCT (
2
)
5.6
0.0056
P10.5 crx+ retina
CCTCCAGTCT (
2
)
1.9
0.0019
Adult retinal
CCTCCAGTCT (
2
)
3.7
0.0037
