Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.18539	Pink1	PTEN induced putative kinase 1	4		68943
Gene Ontology	ATP binding | kinase activity | magnesium ion binding | mitochondrion | protein amino acid phosphorylation | protein kinase activity | protein serine/threonine kinase activity | protein-tyrosine kinase activity | transferase activity
Human Homolog	PINK1[PTEN induced putative kinase 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 121 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CAAAAAAAAA (157) 47.3 0.0473 P8 Cb GC CCAAAAAAAA (35) 22.8 0.0228 P8 Cb GC CCAGAAAAAA (8) 4.9 0.0049 P8 Cb GC ATGGCTCTGT 1.6 0.0016 P8 Cb GC CCGAAAAAAA (2) 1.6 0.0016 Cb medulloblastoma CAAAAAAAAA (157) 92.5 0.0925 Cb medulloblastoma CCAAAAAAAA (35) 90.2 0.0902 Cb medulloblastoma CCAGAAAAAA (8) 2.3 0.0023 P8 GC+1d culture CCAAAAAAAA (35) 38.8 0.0388 P8 GC+1d culture CAAAAAAAAA (157) 37.7 0.0377 P8 GC+1d culture CCAGAAAAAA (8) 2.3 0.0023 P8 GC+1d culture CTGGTTGCTG (6) 2.3 0.0023 P8 GC+1d culture GTCATATCCA (5) 2.3 0.0023 P8 GC+SHH+1d culture CAAAAAAAAA (157) 58.5 0.0585 P8 GC+SHH+1d culture CCAAAAAAAA (35) 39.8 0.0398 P8 GC+SHH+1d culture GTCATATCCA (5) 2.3 0.0023 P8 GC+SHH+1d culture CCAAAACAAA (8) 1.2 0.0012 P8 GC+SHH+1d culture CCAGAAAAAA (8) 1.2 0.0012 P8 GC+SHH+1d culture CCGAAAAAAA (2) 1.2 0.0012 P8 GC+SHH+1d culture CTGGTTGCTG (6) 1.2 0.0012 P8 GC+SHH+1d culture GCTGAGGCGC (2) 1.2 0.0012 P8 GC+SHH+1d culture TCAGGAGAAT (2) 1.2 0.0012 3T3 fibroblasts CTGGTTGCTG (6) 3.5 0.0035 3T3 fibroblasts GCTGAGGCGC (2) 3.5 0.0035 E15 cortex CAAAAAAAAA (157) 34.6 0.0346 E15 cortex CCAAAAAAAA (35) 9.9 0.0099 E15 cortex CCAGAAAAAA (8) 4.9 0.0049 E15 cortex GTCATATCCA (5) 4.9 0.0049 P1 cortex CCAAAAAAAA (35) 40.9 0.0409 P1 cortex CAAAAAAAAA (157) 22.7 0.0227 P1 cortex CCAAAACAAA (8) 4.5 0.0045 P1 cortex CCAGAAAAAA (8) 4.5 0.0045 P1 cortex GCTGAGGCGC (2) 4.5 0.0045 P1 cortex GTCATATCCA (5) 4.5 0.0045 P1 cortex TCAGGAGAAT (2) 4.5 0.0045 Hypothalamus CAAAAAAAAA (157) 39.8 0.0398 Hypothalamus CCAAAAAAAA (35) 38 0.038 Hypothalamus CTGGTTGCTG (6) 7.2 0.0072 Hypothalamus ATGGCTCTGT 5.4 0.0054 Hypothalamus ACAGTATACG (2) 3.6 0.0036 Hypothalamus GCTGAGGCGC (2) 3.6 0.0036 Hypothalamus GTCATATCCA (5) 1.8 0.0018 Hypothalamus TCAGGAGAAT (2) 1.8 0.0018 E12.5 retina CAAAAAAAAA (157) 22.5 0.0225 E12.5 retina CCAAAAAAAA (35) 16.9 0.0169 E12.5 retina GCTGAGGCGC (2) 7.5 0.0075 E12.5 retina GTGGCTTTCA (8) 1.9 0.0019 E14.5 retina CCAAAAAAAA (35) 18.2 0.0182 E14.5 retina CAAAAAAAAA (157) 9.1 0.0091 E14.5 retina GTCATATCCA (5) 3.6 0.0036 E14.5 retina CCAAAACAAA (8) 1.8 0.0018 E14.5 retina CCAGAAAAAA (8) 1.8 0.0018 E14.5 retina CCGAATAAAA 1.8 0.0018 E14.5 retina CTGGTTGCTG (6) 1.8 0.0018 E14.5 retina GCTCATAGTC (4) 1.8 0.0018 E16.5 retina CCAAAAAAAA (35) 16.3 0.0163 E16.5 retina CAAAAAAAAA (157) 9.1 0.0091 E16.5 retina ATGGCTCTGT 1.8 0.0018 E16.5 retina CTGGTTGCTG (6) 1.8 0.0018 E16.5 retina GTCATATCCA (5) 1.8 0.0018 E16.5 retina TCAGGAGAAT (2) 1.8 0.0018 E18.5 retina CAAAAAAAAA (157) 41.8 0.0418 E18.5 retina CCAAAAAAAA (35) 38.2 0.0382 E18.5 retina CCAGAAAAAA (8) 3.6 0.0036 E18.5 retina CCGAAAAAAA (2) 1.8 0.0018 E18.5 retina CCGAATAAAA 1.8 0.0018 E18.5 retina GTCATATCCA (5) 1.8 0.0018 P0.5 retina CAAAAAAAAA (157) 137.4 0.1374 P0.5 retina CCAAAAAAAA (35) 29.4 0.0294 P0.5 retina GTGGCTTTCA (8) 3.9 0.0039 P0.5 retina CCAAAACAAA (8) 2 0.002 P0.5 retina CCGAAAAAAA (2) 2 0.002 P0.5 retina CTGGTTGCTG (6) 2 0.002 P0.5 retina GCTGAGGCGC (2) 2 0.002 P2.5 retina CAAAAAAAAA (157) 52.8 0.0528 P2.5 retina CCAAAAAAAA (35) 44 0.044 P2.5 retina ATGGCTCTGT 3.5 0.0035 P2.5 retina CCAAAACAAA (8) 1.8 0.0018 P2.5 retina CCAGAAAAAA (8) 1.8 0.0018 P2.5 retina CCGAAAAAAA (2) 1.8 0.0018 P2.5 retina TCAGGAGAAT (2) 1.8 0.0018 P4.5 retina CAAAAAAAAA (157) 41.6 0.0416 P4.5 retina CCAAAAAAAA (35) 39.6 0.0396 P4.5 retina ATGGCTCTGT 2 0.002 P4.5 retina CCGAATAAAA 2 0.002 P6.5 retina CCAAAAAAAA (35) 38.3 0.0383 P6.5 retina CAAAAAAAAA (157) 31.7 0.0317 P6.5 retina ATGGCTCTGT 3.3 0.0033 P6.5 retina GTCATATCCA (5) 3.3 0.0033 P6.5 retina TCAGGAGAAT (2) 3.3 0.0033 P6.5 retina CCAGAAAAAA (8) 1.7 0.0017 P6.5 retina CCGAAAAAAA (2) 1.7 0.0017 P6.5 retina CCGAATAAAA 1.7 0.0017 P6.5 retina GCTGAGGCGC (2) 1.7 0.0017 P10.5 crx- retina CCAAAAAAAA (35) 14.9 0.0149 P10.5 crx- retina CAAAAAAAAA (157) 13 0.013 P10.5 crx- retina CTGGTTGCTG (6) 7.4 0.0074 P10.5 crx- retina ATGGCTCTGT 1.9 0.0019 P10.5 crx- retina CCAGAAAAAA (8) 1.9 0.0019 P10.5 crx- retina GCTCATAGTC (4) 1.9 0.0019 P10.5 crx- retina GTCATATCCA (5) 1.9 0.0019 P10.5 crx- retina TCAGGAGAAT (2) 1.9 0.0019 P10.5 crx+ retina CCAAAAAAAA (35) 38.4 0.0384 P10.5 crx+ retina CAAAAAAAAA (157) 32.7 0.0327 P10.5 crx+ retina GTCATATCCA (5) 5.8 0.0058 P10.5 crx+ retina ATGGCTCTGT 3.8 0.0038 P10.5 crx+ retina CTGGTTGCTG (6) 3.8 0.0038 P10.5 crx+ retina CCAAAACAAA (8) 1.9 0.0019 P10.5 crx+ retina CCAGAAAAAA (8) 1.9 0.0019 P10.5 crx+ retina TCAGGAGAAT (2) 1.9 0.0019 Adult retinal CCAAAAAAAA (35) 35.2 0.0352 Adult retinal CAAAAAAAAA (157) 20.4 0.0204 Adult retinal CCAGAAAAAA (8) 1.9 0.0019 Adult retinal CCGAAAAAAA (2) 1.9 0.0019 Adult retinal GCTCATAGTC (4) 1.9 0.0019 Adult retinal GTCATATCCA (5) 1.9 0.0019 Adult retinal TCAGGAGAAT (2) 1.9 0.0019 ONL CAAAAAAAAA (157) 17.2 0.0172 ONL CCAAAAAAAA (35) 7.7 0.0077 ONL GTCATATCCA (5) 1.9 0.0019 ONL GTGGCTTTCA (8) 1.9 0.0019