Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.18556	Slc39a7	solute carrier family 39 (zinc transporter), member 7	17	17 18.48 cM	14977
Gene Ontology	extracellular space | integral to membrane
Human Homolog	SLC39A7[solute carrier family 39 (zinc transporter), member 7]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 72 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATGTCTCAAA (5) 388.3 0.3883 P8 Cb GC AAGAAGACTG (3) 1.6 0.0016 P8 Cb GC AGTTGTTCTC (2) 1.6 0.0016 P8 Cb GC GAAAAATAAA (9) 1.6 0.0016 P8 Cb GC GTGACCTGGA (5) 1.6 0.0016 Cb medulloblastoma ATGTCTCAAA (5) 145.7 0.1457 Cb medulloblastoma AAGAAGACTG (3) 4.6 0.0046 Cb medulloblastoma GATCATATGT (2) 4.6 0.0046 P8 GC+1d culture ATGTCTCAAA (5) 137 0.137 P8 GC+1d culture AAGAAGACTG (3) 9.1 0.0091 P8 GC+1d culture AGTTGTTCTC (2) 1.1 0.0011 P8 GC+1d culture CCGCGGGGCA (2) 1.1 0.0011 P8 GC+1d culture GATCATATGT (2) 1.1 0.0011 P8 GC+1d culture TTGGTAAAGG (2) 1.1 0.0011 P8 GC+SHH+1d culture ATGTCTCAAA (5) 291.6 0.2916 P8 GC+SHH+1d culture AAGAAGACTG (3) 8.2 0.0082 P8 GC+SHH+1d culture AGTTGTTCTC (2) 1.2 0.0012 P8 GC+SHH+1d culture ATGGTACTGA (3) 1.2 0.0012 P8 GC+SHH+1d culture GAAAAATAAA (9) 1.2 0.0012 P8 GC+SHH+1d culture TTGGTAAAGG (2) 1.2 0.0012 3T3 fibroblasts ATGTCTCAAA (5) 112.2 0.1122 3T3 fibroblasts AAGAAGACTG (3) 17.5 0.0175 3T3 fibroblasts GATGCGCTTC 10.5 0.0105 3T3 fibroblasts GGCCTGCGGG (2) 7 0.007 E15 cortex ATGTCTCAAA (5) 59.4 0.0594 E15 cortex GGCCTGCGGG (2) 4.9 0.0049 E15 cortex GTGACCTGGA (5) 4.9 0.0049 P1 cortex ATGTCTCAAA (5) 150 0.15 Hypothalamus ATGTCTCAAA (5) 255.4 0.2554 Hypothalamus ATGGTACTGA (3) 1.8 0.0018 Hypothalamus GATCATATGT (2) 1.8 0.0018 E12.5 retina ATGTCTCAAA (5) 779.1 0.7791 E12.5 retina AAGAAGACTG (3) 1.9 0.0019 E12.5 retina GATCATATGT (2) 1.9 0.0019 E14.5 retina ATGTCTCAAA (5) 723.3 0.7233 E14.5 retina GAAAAATAAA (9) 1.8 0.0018 E14.5 retina GATCATATGT (2) 1.8 0.0018 E14.5 retina TTGGTAAAGG (2) 1.8 0.0018 E16.5 retina ATGTCTCAAA (5) 726.3 0.7263 E16.5 retina GATCATATGT (2) 3.6 0.0036 E16.5 retina GAAAAATAAA (9) 1.8 0.0018 E18.5 retina ATGTCTCAAA (5) 782.2 0.7822 E18.5 retina GAAAAATAAA (9) 9.1 0.0091 E18.5 retina AAGAAGACTG (3) 1.8 0.0018 E18.5 retina GATCATATGT (2) 1.8 0.0018 P0.5 retina ATGTCTCAAA (5) 351.3 0.3513 P0.5 retina AAGAAGACTG (3) 9.8 0.0098 P2.5 retina ATGTCTCAAA (5) 559.6 0.5596 P2.5 retina GAAAAATAAA (9) 5.3 0.0053 P2.5 retina GATCATATGT (2) 3.5 0.0035 P4.5 retina ATGTCTCAAA (5) 487.4 0.4874 P4.5 retina GAAAAATAAA (9) 4 0.004 P4.5 retina AAGAAGACTG (3) 2 0.002 P4.5 retina GTGACCTGGA (5) 2 0.002 P6.5 retina ATGTCTCAAA (5) 215.1 0.2151 P6.5 retina GATCATATGT (2) 5 0.005 P6.5 retina AAGAAGACTG (3) 3.3 0.0033 P6.5 retina CCGCGGGGCA (2) 1.7 0.0017 P10.5 crx- retina ATGTCTCAAA (5) 178.3 0.1783 P10.5 crx- retina GATCATATGT (2) 1.9 0.0019 P10.5 crx+ retina ATGTCTCAAA (5) 265.3 0.2653 P10.5 crx+ retina GATCATATGT (2) 3.8 0.0038 P10.5 crx+ retina TTGGTAAAGG (2) 1.9 0.0019 Adult retinal ATGTCTCAAA (5) 105.5 0.1055 Adult retinal AAGAAGACTG (3) 5.6 0.0056 Adult retinal AGTTGTTCTC (2) 1.9 0.0019 Adult retinal CCGCGGGGCA (2) 1.9 0.0019 Adult retinal GATCATATGT (2) 1.9 0.0019 Adult retinal GTGACCTGGA (5) 1.9 0.0019 ONL ATGTCTCAAA (5) 141.7 0.1417 ONL AAGAAGACTG (3) 3.8 0.0038 ONL GATCATATGT (2) 1.9 0.0019