Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.186	Tax1bp3	Tax1 (human T-cell leukemia virus type I) binding protein 3	11		76281
Human Homolog	TAX1BP3[Tax1 (human T-cell leukemia virus type I) binding protein 3]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 83 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTCAACACTT (2) 6.5 0.0065 P8 Cb GC AACACAATCA (6) 1.6 0.0016 P8 Cb GC CTCTGTCTGT (3) 1.6 0.0016 Cb medulloblastoma CTCTGTCTGT (3) 9.2 0.0092 Cb medulloblastoma AACACAATCA (6) 6.9 0.0069 Cb medulloblastoma GTGCACGTCT (4) 2.3 0.0023 Cb medulloblastoma TGACCAAGCC (8) 2.3 0.0023 Cb medulloblastoma TTCAACACTT (2) 2.3 0.0023 P8 GC+1d culture TTCAACACTT (2) 22.8 0.0228 P8 GC+1d culture AACACAATCA (6) 5.7 0.0057 P8 GC+1d culture GGCTGGGCAG (6) 3.4 0.0034 P8 GC+1d culture GTGCACGTCT (4) 3.4 0.0034 P8 GC+1d culture CTCTGTCTGT (3) 1.1 0.0011 P8 GC+SHH+1d culture TTCAACACTT (2) 12.9 0.0129 P8 GC+SHH+1d culture CTCTGTCTGT (3) 5.9 0.0059 P8 GC+SHH+1d culture GTGCACGTCT (4) 3.5 0.0035 P8 GC+SHH+1d culture GGCTGGGCAG (6) 2.3 0.0023 P8 GC+SHH+1d culture TGACAAGCCA (3) 1.2 0.0012 3T3 fibroblasts TTCAACACTT (2) 7 0.007 3T3 fibroblasts CTCTGTCTGT (3) 3.5 0.0035 3T3 fibroblasts GGCTGGGCAG (6) 3.5 0.0035 3T3 fibroblasts GTGCACGTCT (4) 3.5 0.0035 E15 cortex GTGCACGTCT (4) 9.9 0.0099 E15 cortex AACACAATCA (6) 4.9 0.0049 E15 cortex GCTGGCAGCA (4) 4.9 0.0049 P1 cortex GTGCACGTCT (4) 13.6 0.0136 P1 cortex TTCAACACTT (2) 9.1 0.0091 P1 cortex CTCTGTCTGT (3) 4.5 0.0045 Hypothalamus TTCAACACTT (2) 5.4 0.0054 Hypothalamus GGCTGGGGCA (2) 1.8 0.0018 Hypothalamus GTGCACGTCT (4) 1.8 0.0018 Hypothalamus TGACAAGCCA (3) 1.8 0.0018 E12.5 retina TTCAACACTT (2) 11.3 0.0113 E12.5 retina AACACAATCA (6) 5.6 0.0056 E12.5 retina CTCTGTCTGT (3) 1.9 0.0019 E12.5 retina GTGCACGTCT (4) 1.9 0.0019 E12.5 retina TGACCAAGCC (8) 1.9 0.0019 E14.5 retina TTCAACACTT (2) 9.1 0.0091 E14.5 retina AACACAATCA (6) 3.6 0.0036 E14.5 retina GCTGGCAGCA (4) 1.8 0.0018 E14.5 retina GTGCACGTCT (4) 1.8 0.0018 E16.5 retina TTCAACACTT (2) 12.7 0.0127 E16.5 retina AACACAATCA (6) 3.6 0.0036 E16.5 retina CTCTGTCTGT (3) 1.8 0.0018 E16.5 retina GTGCACGTCT (4) 1.8 0.0018 E18.5 retina TTCAACACTT (2) 16.4 0.0164 E18.5 retina GTGCACGTCT (4) 7.3 0.0073 E18.5 retina GGCTGGGGCA (2) 3.6 0.0036 E18.5 retina CTACAAGTTG 1.8 0.0018 E18.5 retina TGACCAAGCC (8) 1.8 0.0018 P0.5 retina GTGCACGTCT (4) 7.9 0.0079 P0.5 retina TTCAACACTT (2) 3.9 0.0039 P0.5 retina TGACCAAGCC (8) 2 0.002 P2.5 retina TTCAACACTT (2) 8.8 0.0088 P2.5 retina CTCTGTCTGT (3) 3.5 0.0035 P2.5 retina AACACAATCA (6) 1.8 0.0018 P2.5 retina TGACCAAGCC (8) 1.8 0.0018 P4.5 retina TTCAACACTT (2) 5.9 0.0059 P4.5 retina AACACAATCA (6) 2 0.002 P4.5 retina CTCTGTCTGT (3) 2 0.002 P4.5 retina GGCTGGGCAG (6) 2 0.002 P4.5 retina GTGCACGTCT (4) 2 0.002 P6.5 retina CTCTGTCTGT (3) 1.7 0.0017 P6.5 retina GGCTGGGCAG (6) 1.7 0.0017 P6.5 retina TTCAACACTT (2) 1.7 0.0017 P10.5 crx- retina AACACAATCA (6) 7.4 0.0074 P10.5 crx- retina GTGCACGTCT (4) 5.6 0.0056 P10.5 crx- retina CTCTGTCTGT (3) 3.7 0.0037 P10.5 crx- retina GGCTGGGCAG (6) 3.7 0.0037 P10.5 crx- retina TTCAACACTT (2) 3.7 0.0037 P10.5 crx+ retina AACACAATCA (6) 5.8 0.0058 P10.5 crx+ retina GTGCACGTCT (4) 5.8 0.0058 P10.5 crx+ retina TTCAACACTT (2) 5.8 0.0058 P10.5 crx+ retina CTACAAGTTG 1.9 0.0019 Adult retinal AACACAATCA (6) 3.7 0.0037 Adult retinal CTCTGTCTGT (3) 1.9 0.0019 Adult retinal GTGCACGTCT (4) 1.9 0.0019 Adult retinal TGACAAGCCA (3) 1.9 0.0019 Adult retinal TTCAACACTT (2) 1.9 0.0019 ONL AACACAATCA (6) 3.8 0.0038 ONL GTGCACGTCT (4) 3.8 0.0038 ONL GGCTGGGCAG (6) 1.9 0.0019 ONL TTCAACACTT (2) 1.9 0.0019