Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.18705	Vps4b	vacuolar protein sorting 4b (yeast)	1		20479
Gene Ontology	ATP binding | ATPase activity | endosome | endosome transport | nucleotide binding
Human Homolog	VPS4B[vacuolar protein sorting 4B (yeast)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 72 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CTATGCTATA 3.3 0.0033 P8 Cb GC CACAACTGGT 1.6 0.0016 P8 Cb GC GAGCTTTAGA 1.6 0.0016 P8 Cb GC TAAAATGTGG (6) 1.6 0.0016 P8 Cb GC TCCTCATCCT (4) 1.6 0.0016 P8 Cb GC TTCTATTCTC 1.6 0.0016 Cb medulloblastoma TATTTAAAAA (8) 4.6 0.0046 Cb medulloblastoma AGTACTTGTT (2) 2.3 0.0023 Cb medulloblastoma CTATGCTATA 2.3 0.0023 Cb medulloblastoma TCCTCATCCT (4) 2.3 0.0023 Cb medulloblastoma TTCTATTCTC 2.3 0.0023 P8 GC+1d culture CTATGCTATA 2.3 0.0023 P8 GC+1d culture TAAAATGTGG (6) 2.3 0.0023 P8 GC+1d culture AGTACTTGTT (2) 1.1 0.0011 P8 GC+1d culture ATCTACATAG (2) 1.1 0.0011 P8 GC+1d culture GCGTCCACGA (2) 1.1 0.0011 P8 GC+1d culture TATTTGAATA (4) 1.1 0.0011 P8 GC+SHH+1d culture TGAACCAGGA (2) 3.5 0.0035 P8 GC+SHH+1d culture AGTACTTGTT (2) 1.2 0.0012 P8 GC+SHH+1d culture CTATGCTATA 1.2 0.0012 P8 GC+SHH+1d culture TAAAATGTGG (6) 1.2 0.0012 P8 GC+SHH+1d culture TATTTAAAAA (8) 1.2 0.0012 P8 GC+SHH+1d culture TCCTCATCCT (4) 1.2 0.0012 P8 GC+SHH+1d culture TTCTATTCTC 1.2 0.0012 3T3 fibroblasts CTATGCTATA 3.5 0.0035 P1 cortex CACAACTGGT 9.1 0.0091 P1 cortex TTCTATTCTC 4.5 0.0045 E12.5 retina CTATGCTATA 3.8 0.0038 E12.5 retina AGTACTTGTT (2) 1.9 0.0019 E12.5 retina TAAAATGTGG (6) 1.9 0.0019 E12.5 retina TATTTGAATA (4) 1.9 0.0019 E12.5 retina TGAACCAGGA (2) 1.9 0.0019 E14.5 retina TGAACCAGGA (2) 3.6 0.0036 E14.5 retina CTATGCTATA 1.8 0.0018 E14.5 retina GAGCTTTAGA 1.8 0.0018 E14.5 retina TCCTCATCCT (4) 1.8 0.0018 E16.5 retina CTATGCTATA 3.6 0.0036 E16.5 retina TGAACCAGGA (2) 3.6 0.0036 E18.5 retina CTATGCTATA 3.6 0.0036 E18.5 retina TATTTAAAAA (8) 3.6 0.0036 E18.5 retina TGAACCAGGA (2) 3.6 0.0036 E18.5 retina GAGCTTTAGA 1.8 0.0018 E18.5 retina TATTTGAATA (4) 1.8 0.0018 E18.5 retina TTCTATTCTC 1.8 0.0018 P0.5 retina TGAACCAGGA (2) 5.9 0.0059 P0.5 retina CTATGCTATA 2 0.002 P0.5 retina GCGTCCACGA (2) 2 0.002 P2.5 retina TGAACCAGGA (2) 29.9 0.0299 P2.5 retina TATTTAAAAA (8) 5.3 0.0053 P2.5 retina CTATGCTATA 1.8 0.0018 P2.5 retina TTCTATTCTC 1.8 0.0018 P4.5 retina TGAACCAGGA (2) 25.8 0.0258 P4.5 retina TTCTATTCTC 5.9 0.0059 P4.5 retina CTATGCTATA 2 0.002 P6.5 retina TGAACCAGGA (2) 16.7 0.0167 P6.5 retina TAAAATGTGG (6) 3.3 0.0033 P6.5 retina ATCTACATAG (2) 1.7 0.0017 P6.5 retina CTATGCTATA 1.7 0.0017 P6.5 retina TATTTAAAAA (8) 1.7 0.0017 P6.5 retina TTCTATTCTC 1.7 0.0017 P10.5 crx- retina TGAACCAGGA (2) 20.4 0.0204 P10.5 crx- retina CTATGCTATA 1.9 0.0019 P10.5 crx- retina TAAAATGTGG (6) 1.9 0.0019 P10.5 crx- retina TATTTAAAAA (8) 1.9 0.0019 P10.5 crx+ retina TGAACCAGGA (2) 13.5 0.0135 P10.5 crx+ retina ATCTACATAG (2) 1.9 0.0019 P10.5 crx+ retina CTATGCTATA 1.9 0.0019 Adult retinal TGAACCAGGA (2) 7.4 0.0074 Adult retinal TTCTATTCTC 5.6 0.0056 Adult retinal CTATGCTATA 1.9 0.0019 Adult retinal GCGTCCACGA (2) 1.9 0.0019 Adult retinal TATTTAAAAA (8) 1.9 0.0019