Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.187239
B930096L08Rik
RIKEN cDNA B930096L08 gene
6
209773
Mm.187239
8030453O22Rik
RIKEN cDNA 8030453O22 gene
6
77209
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 53 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TGGTTGCTGG (
369
)
68.5
0.0685
P8 Cb GC
CAGAATGTTG
(
4
)
1.6
0.0016
P8 Cb GC
CTGGAGAAGG (
14
)
1.6
0.0016
Cb medulloblastoma
TGGTTGCTGG (
369
)
113.3
0.1133
Cb medulloblastoma
TGAGTTCGCT (
3
)
2.3
0.0023
P8 GC+1d culture
TGGTTGCTGG (
369
)
57.1
0.0571
P8 GC+1d culture
ACACTTAGGC
(
2
)
2.3
0.0023
P8 GC+1d culture
CAGAATGTTG
(
4
)
1.1
0.0011
P8 GC+SHH+1d culture
TGGTTGCTGG (
369
)
89
0.089
P8 GC+SHH+1d culture
ACACTTAGGC
(
2
)
1.2
0.0012
3T3 fibroblasts
TGGTTGCTGG (
369
)
220.8
0.2208
3T3 fibroblasts
ACACTTAGGC
(
2
)
3.5
0.0035
3T3 fibroblasts
CTGTCCACAG
(
4
)
3.5
0.0035
E15 cortex
TGGTTGCTGG (
369
)
277.1
0.2771
E15 cortex
TGAGCCGCTG (
5
)
4.9
0.0049
E15 cortex
TGAGTTCGCT (
3
)
4.9
0.0049
P1 cortex
TGGTTGCTGG (
369
)
86.4
0.0864
P1 cortex
TGAGTTCGCT (
3
)
4.5
0.0045
Hypothalamus
TGGTTGCTGG (
369
)
349.6
0.3496
Hypothalamus
TGAGTTCGCT (
3
)
5.4
0.0054
E12.5 retina
TGGTTGCTGG (
369
)
157.7
0.1577
E12.5 retina
ACACTTAGGC
(
2
)
1.9
0.0019
E14.5 retina
TGGTTGCTGG (
369
)
936.5
0.9365
E16.5 retina
TGGTTGCTGG (
369
)
767.9
0.7679
E16.5 retina
CTGGAGAAGG (
14
)
1.8
0.0018
E18.5 retina
TGGTTGCTGG (
369
)
252.8
0.2528
P0.5 retina
TGGTTGCTGG (
369
)
190.4
0.1904
P0.5 retina
ACACTTAGGC
(
2
)
2
0.002
P2.5 retina
TGGTTGCTGG (
369
)
165.4
0.1654
P2.5 retina
TGAGTTCGCT (
3
)
10.6
0.0106
P2.5 retina
ACACTTAGGC
(
2
)
1.8
0.0018
P2.5 retina
TGAGCCGCTG (
5
)
1.8
0.0018
P4.5 retina
TGGTTGCTGG (
369
)
150.6
0.1506
P4.5 retina
TGAGTTCGCT (
3
)
35.7
0.0357
P4.5 retina
CAGAATGTTG
(
4
)
4
0.004
P6.5 retina
TGGTTGCTGG (
369
)
156.7
0.1567
P6.5 retina
TGAGTTCGCT (
3
)
20
0.02
P6.5 retina
ACACTTAGGC
(
2
)
1.7
0.0017
P6.5 retina
CAGAATGTTG
(
4
)
1.7
0.0017
P6.5 retina
CTGGAGAAGG (
14
)
1.7
0.0017
P10.5 crx- retina
TGGTTGCTGG (
369
)
280.5
0.2805
P10.5 crx- retina
TGAGTTCGCT (
3
)
16.7
0.0167
P10.5 crx- retina
CAGAATGTTG
(
4
)
1.9
0.0019
P10.5 crx- retina
TGAGCCGCTG (
5
)
1.9
0.0019
P10.5 crx+ retina
TGGTTGCTGG (
369
)
101.9
0.1019
P10.5 crx+ retina
TGAGTTCGCT (
3
)
25
0.025
P10.5 crx+ retina
ACACTTAGGC
(
2
)
1.9
0.0019
P10.5 crx+ retina
CAGAATGTTG
(
4
)
1.9
0.0019
Adult retinal
TGGTTGCTGG (
369
)
214.8
0.2148
Adult retinal
TGAGTTCGCT (
3
)
7.4
0.0074
ONL
TGGTTGCTGG (
369
)
398.4
0.3984
ONL
CTGTCCACAG
(
4
)
3.8
0.0038
ONL
TGAGTTCGCT (
3
)
3.8
0.0038
