Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.18725
4921521F21Rik
RIKEN cDNA 4921521F21 gene
1
70861
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 43 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TAAAAAAAAA (
196
)
47.3
0.0473
Cb medulloblastoma
TAAAAAAAAA (
196
)
106.4
0.1064
P8 GC+1d culture
TAAAAAAAAA (
196
)
66.2
0.0662
P8 GC+SHH+1d culture
TAAAAAAAAA (
196
)
93.7
0.0937
3T3 fibroblasts
GTCATAGCTG (
590
)
10.5
0.0105
3T3 fibroblasts
TAAAAAAAAA (
196
)
7
0.007
E15 cortex
TAAAAAAAAA (
196
)
9.9
0.0099
E15 cortex
GTCATAGCTG (
590
)
4.9
0.0049
P1 cortex
TAAAAAAAAA (
196
)
50
0.05
Hypothalamus
TAAAAAAAAA (
196
)
32.6
0.0326
E12.5 retina
TAAAAAAAAA (
196
)
24.4
0.0244
E12.5 retina
GATTTCTACT
(
6
)
16.9
0.0169
E12.5 retina
GATTTTTACT
(
3
)
7.5
0.0075
E12.5 retina
ATGGAGCTGA
(
3
)
1.9
0.0019
E14.5 retina
TAAAAAAAAA (
196
)
41.9
0.0419
E16.5 retina
TAAAAAAAAA (
196
)
23.5
0.0235
E16.5 retina
GATTTCTACT
(
6
)
1.8
0.0018
E18.5 retina
TAAAAAAAAA (
196
)
107.3
0.1073
P0.5 retina
GATTTTTACT
(
3
)
86.4
0.0864
P0.5 retina
GATTTCTACT
(
6
)
82.4
0.0824
P0.5 retina
ATGGAGCTGA
(
3
)
53
0.053
P0.5 retina
TAAAAAAAAA (
196
)
37.3
0.0373
P0.5 retina
GTCATAGCTG (
590
)
3.9
0.0039
P2.5 retina
TAAAAAAAAA (
196
)
72.2
0.0722
P2.5 retina
GTCATAGCTG (
590
)
1.8
0.0018
P4.5 retina
TAAAAAAAAA (
196
)
122.8
0.1228
P4.5 retina
GTCATAGCTG (
590
)
2
0.002
P6.5 retina
TAAAAAAAAA (
196
)
63.4
0.0634
P6.5 retina
GTCATAGCTG (
590
)
3.3
0.0033
P6.5 retina
GATTTTTACT
(
3
)
1.7
0.0017
P10.5 crx- retina
ATGGAGCTGA
(
3
)
14.9
0.0149
P10.5 crx- retina
GATTTTTACT
(
3
)
9.3
0.0093
P10.5 crx- retina
TAAAAAAAAA (
196
)
9.3
0.0093
P10.5 crx- retina
GATTTCTACT
(
6
)
7.4
0.0074
P10.5 crx+ retina
TAAAAAAAAA (
196
)
25
0.025
P10.5 crx+ retina
GATTTCTACT
(
6
)
7.7
0.0077
P10.5 crx+ retina
GATTTTTACT
(
3
)
5.8
0.0058
P10.5 crx+ retina
ATGGAGCTGA
(
3
)
1.9
0.0019
Adult retinal
TAAAAAAAAA (
196
)
18.5
0.0185
Adult retinal
GTCATAGCTG (
590
)
1.9
0.0019
ONL
TAAAAAAAAA (
196
)
28.7
0.0287
ONL
GTCATAGCTG (
590
)
5.7
0.0057
ONL
GATTTTTACT
(
3
)
1.9
0.0019
