Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.188432	AA553322	expressed sequence AA553322	9		102420
Mm.188432	9430083A17Rik	RIKEN cDNA 9430083A17 gene	13		77428
Mm.188432	Spin	spindlin	13	13 31.0 cM	20729
Gene Ontology	cell cycle | development | female meiosis | gametogenesis | molecular_function unknown | spindle
Human Homolog	SPIN[spindlin]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 114 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAATAATAAA (8) 168 0.168 P8 Cb GC CTCTCTTCTA (8) 14.7 0.0147 P8 Cb GC GTTCGACCAG (4) 13.1 0.0131 P8 Cb GC TCTGTGTCCT (9) 6.5 0.0065 P8 Cb GC TGAACCAAGG (3) 1.6 0.0016 Cb medulloblastoma GAATAATAAA (8) 152.6 0.1526 Cb medulloblastoma CTCTCTTCTA (8) 9.2 0.0092 Cb medulloblastoma TCTGTGTCCT (9) 4.6 0.0046 Cb medulloblastoma TCAAAGAGAC (4) 2.3 0.0023 P8 GC+1d culture GAATAATAAA (8) 147.3 0.1473 P8 GC+1d culture CTCTCTTCTA (8) 14.8 0.0148 P8 GC+1d culture GTTCGACCAG (4) 5.7 0.0057 P8 GC+1d culture TCAAAGAGAC (4) 5.7 0.0057 P8 GC+1d culture AAGGGTTTAT (7) 2.3 0.0023 P8 GC+1d culture TCTGTGTCCT (9) 1.1 0.0011 P8 GC+1d culture TGAACCAAGG (3) 1.1 0.0011 P8 GC+SHH+1d culture GAATAATAAA (8) 165.1 0.1651 P8 GC+SHH+1d culture TCAAAGAGAC (4) 11.7 0.0117 P8 GC+SHH+1d culture CTCTCTTCTA (8) 8.2 0.0082 P8 GC+SHH+1d culture GTTCGACCAG (4) 4.7 0.0047 P8 GC+SHH+1d culture TCTGTGTCCT (9) 3.5 0.0035 P8 GC+SHH+1d culture TCCAAAGAGA (4) 2.3 0.0023 P8 GC+SHH+1d culture TGTTGCTGGG (6) 1.2 0.0012 P8 GC+SHH+1d culture TTCACATTTA (9) 1.2 0.0012 3T3 fibroblasts CTCTCTTCTA (8) 21 0.021 3T3 fibroblasts GTCATAGCTG (590) 10.5 0.0105 3T3 fibroblasts GAATAATAAA (8) 7 0.007 E15 cortex GAATAATAAA (8) 9.9 0.0099 E15 cortex AAGGGTTTAT (7) 4.9 0.0049 E15 cortex GTCATAGCTG (590) 4.9 0.0049 E15 cortex TCTGTGTCCT (9) 4.9 0.0049 P1 cortex GAATAATAAA (8) 113.6 0.1136 P1 cortex CTCTCTTCTA (8) 13.6 0.0136 P1 cortex AAGGGTTTAT (7) 4.5 0.0045 P1 cortex TCAAAGAGAC (4) 4.5 0.0045 P1 cortex TCCAAAGAGA (4) 4.5 0.0045 P1 cortex TCTGTGTCCT (9) 4.5 0.0045 P1 cortex TTCACATTTA (9) 4.5 0.0045 Hypothalamus GAATAATAAA (8) 193.8 0.1938 Hypothalamus CTCTCTTCTA (8) 14.5 0.0145 Hypothalamus AAGGGTTTAT (7) 1.8 0.0018 Hypothalamus TCAAAGAGAC (4) 1.8 0.0018 Hypothalamus TCCAAAGAGA (4) 1.8 0.0018 Hypothalamus TCTGTGTCCT (9) 1.8 0.0018 E12.5 retina GAATAATAAA (8) 178.3 0.1783 E12.5 retina CTCTCTTCTA (8) 18.8 0.0188 E12.5 retina AAGGGTTTAT (7) 5.6 0.0056 E12.5 retina TCAAAGAGAC (4) 5.6 0.0056 E12.5 retina TCTGTGTCCT (9) 5.6 0.0056 E12.5 retina TCCAAAGAGA (4) 1.9 0.0019 E14.5 retina GAATAATAAA (8) 180.4 0.1804 E14.5 retina CTCTCTTCTA (8) 18.2 0.0182 E14.5 retina AAGGGTTTAT (7) 7.3 0.0073 E14.5 retina GTTCGACCAG (4) 7.3 0.0073 E14.5 retina TCTGTGTCCT (9) 3.6 0.0036 E14.5 retina TGAACCAAGG (3) 1.8 0.0018 E14.5 retina TTCACATTTA (9) 1.8 0.0018 E16.5 retina GAATAATAAA (8) 99.6 0.0996 E16.5 retina CTCTCTTCTA (8) 21.7 0.0217 E16.5 retina AAGGGTTTAT (7) 9.1 0.0091 E16.5 retina GTTCGACCAG (4) 9.1 0.0091 E16.5 retina TCTGTGTCCT (9) 9.1 0.0091 E16.5 retina TCAAAGAGAC (4) 3.6 0.0036 E16.5 retina TGAACCAAGG (3) 1.8 0.0018 E16.5 retina TGTTGCTGGG (6) 1.8 0.0018 E18.5 retina GAATAATAAA (8) 285.6 0.2856 E18.5 retina CTCTCTTCTA (8) 12.7 0.0127 E18.5 retina TCTGTGTCCT (9) 3.6 0.0036 E18.5 retina TCAAAGAGAC (4) 1.8 0.0018 E18.5 retina TCCAAAGAGA (4) 1.8 0.0018 E18.5 retina TGAACCAAGG (3) 1.8 0.0018 P0.5 retina GAATAATAAA (8) 51 0.051 P0.5 retina CTCTCTTCTA (8) 29.4 0.0294 P0.5 retina TCAAAGAGAC (4) 5.9 0.0059 P0.5 retina GTCATAGCTG (590) 3.9 0.0039 P0.5 retina TCCAAAGAGA (4) 3.9 0.0039 P0.5 retina TGAACCAAGG (3) 3.9 0.0039 P0.5 retina GTTCGACCAG (4) 2 0.002 P0.5 retina TCTGTGTCCT (9) 2 0.002 P2.5 retina GAATAATAAA (8) 105.6 0.1056 P2.5 retina CTCTCTTCTA (8) 21.1 0.0211 P2.5 retina TCTGTGTCCT (9) 8.8 0.0088 P2.5 retina AAGGGTTTAT (7) 1.8 0.0018 P2.5 retina GTCATAGCTG (590) 1.8 0.0018 P2.5 retina TCAAAGAGAC (4) 1.8 0.0018 P4.5 retina GAATAATAAA (8) 190.2 0.1902 P4.5 retina CTCTCTTCTA (8) 13.9 0.0139 P4.5 retina TCTGTGTCCT (9) 5.9 0.0059 P4.5 retina TCCAAAGAGA (4) 4 0.004 P4.5 retina AAGGGTTTAT (7) 2 0.002 P4.5 retina GTCATAGCTG (590) 2 0.002 P4.5 retina GTTCGACCAG (4) 2 0.002 P6.5 retina GAATAATAAA (8) 105 0.105 P6.5 retina CTCTCTTCTA (8) 30 0.03 P6.5 retina AAGGGTTTAT (7) 6.7 0.0067 P6.5 retina TCTGTGTCCT (9) 6.7 0.0067 P6.5 retina GTCATAGCTG (590) 3.3 0.0033 P6.5 retina TCAAAGAGAC (4) 3.3 0.0033 P10.5 crx- retina GAATAATAAA (8) 102.2 0.1022 P10.5 crx- retina CTCTCTTCTA (8) 13 0.013 P10.5 crx- retina AAGGGTTTAT (7) 11.1 0.0111 P10.5 crx- retina TCTGTGTCCT (9) 3.7 0.0037 P10.5 crx+ retina GAATAATAAA (8) 48.1 0.0481 P10.5 crx+ retina CTCTCTTCTA (8) 11.5 0.0115 P10.5 crx+ retina AAGGGTTTAT (7) 1.9 0.0019 P10.5 crx+ retina TCTGTGTCCT (9) 1.9 0.0019 P10.5 crx+ retina TGAACCAAGG (3) 1.9 0.0019 Adult retinal GAATAATAAA (8) 11.1 0.0111 Adult retinal CTCTCTTCTA (8) 9.3 0.0093 Adult retinal GTCATAGCTG (590) 1.9 0.0019 Adult retinal TCTGTGTCCT (9) 1.9 0.0019 ONL GAATAATAAA (8) 47.9 0.0479 ONL CTCTCTTCTA (8) 9.6 0.0096 ONL GTCATAGCTG (590) 5.7 0.0057