Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.188544	Rpn1	ribophorin I	6	6 38.0 cM	103963
Gene Ontology	dolichyl-diphosphooligosaccharide-protein glycotransferase activity | endoplasmic reticulum | extracellular space | integral to membrane | protein amino acid glycosylation | transferase activity
Human Homolog	RPN1[ribophorin I]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 57 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAGAATGTAG GTTTTTTAAA 13 0.013 Cb medulloblastoma AAGAATGTAG CATACGCTCA GTTTTTTAAA 23.1 0.0231 P8 GC+1d culture AAGAATGTAG CATACGCTCA GTTTTTTAAA GTTTTTTTAA (2) 20.4 0.0204 P8 GC+SHH+1d culture AAGAATGTAG CATACGCTCA CTTGAAGGGG GTTTTTTAAA 18.8 0.0188 3T3 fibroblasts AAGAATGTAG 7 0.007 E15 cortex GTTTTTTAAA 4.9 0.0049 P1 cortex AAGAATGTAG GTTTTTTAAA 9 0.009 Hypothalamus AAGAATGTAG CATACGCTCA GTTTTTTAAA 36.2 0.0362 E12.5 retina AAGAATGTAG CATACGCTCA GTTTTTTAAA 22.6 0.0226 E14.5 retina AAGAATGTAG CATACGCTCA CTTGAAGGGG GTTTTTTAAA 20 0.02 E16.5 retina AAGAATGTAG CATACGCTCA GTTTTTTAAA 19.9 0.0199 E18.5 retina AAGAATGTAG CATACGCTCA GTTTTTTAAA 14.5 0.0145 P0.5 retina AAGAATGTAG GTTTTTTAAA GTTTTTTTAA (2) 9.9 0.0099 P2.5 retina CATACGCTCA CTTGAAGGGG GTTTTTTAAA 21.1 0.0211 P4.5 retina AAGAATGTAG GTTTTTTAAA GTTTTTTTAA (2) 21.8 0.0218 P6.5 retina AAGAATGTAG CATACGCTCA GTTTTTTAAA GTTTTTTTAA (2) 15 0.015 P10.5 crx- retina CATACGCTCA GTTTTTTAAA 11.1 0.0111 P10.5 crx+ retina CATACGCTCA GTTTTTTAAA 11.5 0.0115 Adult retinal AAGAATGTAG GTTTTTTAAA GTTTTTTTAA (2) 9.3 0.0093 ONL AAGAATGTAG CATACGCTCA GTTTTTTAAA GTTTTTTTAA (2) 15.3 0.0153