Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.188669
2600009E05Rik
RIKEN cDNA 2600009E05 gene
2
77006
Human Homolog
C20orf116[chromosome 20 open reading frame 116]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 86 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CACTGACGAG (
4
)
13.1
0.0131
P8 Cb GC
TGTCTTCATC
(
2
)
4.9
0.0049
P8 Cb GC
ATTCCGAATT (
107
)
1.6
0.0016
Cb medulloblastoma
GTGTCAATAA (
3
)
2.3
0.0023
Cb medulloblastoma
TGTCTTCATC
(
2
)
2.3
0.0023
P8 GC+1d culture
TCTGGAGACA (
11
)
19.4
0.0194
P8 GC+1d culture
GTGTCAATAA (
3
)
6.8
0.0068
P8 GC+1d culture
CACTGACGAG (
4
)
4.6
0.0046
P8 GC+1d culture
TGTCTTCATC
(
2
)
4.6
0.0046
P8 GC+1d culture
TTTTTTTTTG
(
8
)
2.3
0.0023
P8 GC+SHH+1d culture
TCTGGAGACA (
11
)
11.7
0.0117
P8 GC+SHH+1d culture
CACTGACGAG (
4
)
8.2
0.0082
P8 GC+SHH+1d culture
TGTCTTCATC
(
2
)
5.9
0.0059
P8 GC+SHH+1d culture
GTGTCAATAA (
3
)
4.7
0.0047
P8 GC+SHH+1d culture
TTTTTTTTTG
(
8
)
1.2
0.0012
3T3 fibroblasts
TCTGGAGACA (
11
)
10.5
0.0105
3T3 fibroblasts
CACTGACGAG (
4
)
3.5
0.0035
E15 cortex
CACTGACGAG (
4
)
14.8
0.0148
E15 cortex
GTGTCAATAA (
3
)
4.9
0.0049
E15 cortex
TCTGGAGACA (
11
)
4.9
0.0049
P1 cortex
TCTGGAGACA (
11
)
22.7
0.0227
P1 cortex
CACTGACGAG (
4
)
4.5
0.0045
P1 cortex
TTTTTTTTTG
(
8
)
4.5
0.0045
Hypothalamus
GTGTCAATAA (
3
)
5.4
0.0054
Hypothalamus
TGTCTTCATC
(
2
)
5.4
0.0054
Hypothalamus
GTGGGGCACT (
3
)
3.6
0.0036
Hypothalamus
CACTGACGAG (
4
)
1.8
0.0018
Hypothalamus
TCTGGAGACA (
11
)
1.8
0.0018
Hypothalamus
TTTTTTTTTG
(
8
)
1.8
0.0018
E12.5 retina
CACTGACGAG (
4
)
13.1
0.0131
E12.5 retina
TGTCTTCATC
(
2
)
3.8
0.0038
E12.5 retina
GTGTCAATAA (
3
)
1.9
0.0019
E14.5 retina
GTGTCAATAA (
3
)
5.5
0.0055
E14.5 retina
CACTGACGAG (
4
)
1.8
0.0018
E14.5 retina
GTGGGGCACT (
3
)
1.8
0.0018
E16.5 retina
CACTGACGAG (
4
)
10.9
0.0109
E16.5 retina
TGTCTTCATC
(
2
)
7.2
0.0072
E16.5 retina
GTGTCAATAA (
3
)
5.4
0.0054
E16.5 retina
TCTGGAGACA (
11
)
1.8
0.0018
E16.5 retina
TTTTTTTTTG
(
8
)
1.8
0.0018
E18.5 retina
CACTGACGAG (
4
)
7.3
0.0073
E18.5 retina
GTGTCAATAA (
3
)
7.3
0.0073
E18.5 retina
TCTGGAGACA (
11
)
1.8
0.0018
E18.5 retina
TGTCTTCATC
(
2
)
1.8
0.0018
P0.5 retina
CACTGACGAG (
4
)
17.7
0.0177
P0.5 retina
TCTGGAGACA (
11
)
13.7
0.0137
P0.5 retina
TGTCTTCATC
(
2
)
5.9
0.0059
P0.5 retina
GTGTCAATAA (
3
)
2
0.002
P2.5 retina
CACTGACGAG (
4
)
8.8
0.0088
P2.5 retina
GTGTCAATAA (
3
)
5.3
0.0053
P2.5 retina
TGTCTTCATC
(
2
)
3.5
0.0035
P2.5 retina
TTTTTTTTTG
(
8
)
3.5
0.0035
P2.5 retina
ACCCCAGAGG (
3
)
1.8
0.0018
P4.5 retina
TTTTTTTTTG
(
8
)
9.9
0.0099
P4.5 retina
GTGTCAATAA (
3
)
5.9
0.0059
P4.5 retina
TGTCTTCATC
(
2
)
5.9
0.0059
P4.5 retina
TCTGGAGACA (
11
)
4
0.004
P4.5 retina
ATTCCGAATT (
107
)
2
0.002
P4.5 retina
GTGGGGCACT (
3
)
2
0.002
P6.5 retina
CACTGACGAG (
4
)
8.3
0.0083
P6.5 retina
TGTCTTCATC
(
2
)
6.7
0.0067
P6.5 retina
GTGTCAATAA (
3
)
5
0.005
P6.5 retina
TCTGGAGACA (
11
)
5
0.005
P6.5 retina
ATTCCGAATT (
107
)
3.3
0.0033
P6.5 retina
TTTTTTTTTG
(
8
)
3.3
0.0033
P10.5 crx- retina
TGTCTTCATC
(
2
)
5.6
0.0056
P10.5 crx- retina
CACTGACGAG (
4
)
3.7
0.0037
P10.5 crx- retina
TTTTTTTTTG
(
8
)
3.7
0.0037
P10.5 crx- retina
GTGGGGCACT (
3
)
1.9
0.0019
P10.5 crx- retina
TCTGGAGACA (
11
)
1.9
0.0019
P10.5 crx+ retina
TGTCTTCATC
(
2
)
5.8
0.0058
P10.5 crx+ retina
GTGTCAATAA (
3
)
3.8
0.0038
P10.5 crx+ retina
CACTGACGAG (
4
)
1.9
0.0019
P10.5 crx+ retina
GTGGGGCACT (
3
)
1.9
0.0019
P10.5 crx+ retina
TTTTTTTTTG
(
8
)
1.9
0.0019
Adult retinal
CACTGACGAG (
4
)
11.1
0.0111
Adult retinal
GTGTCAATAA (
3
)
5.6
0.0056
Adult retinal
ACCCCAGAGG (
3
)
3.7
0.0037
Adult retinal
TGTCTTCATC
(
2
)
3.7
0.0037
Adult retinal
TAGGCCACAG
1.9
0.0019
Adult retinal
TCTGGAGACA (
11
)
1.9
0.0019
ONL
GTGTCAATAA (
3
)
9.6
0.0096
ONL
TGTCTTCATC
(
2
)
7.7
0.0077
ONL
ATTCCGAATT (
107
)
3.8
0.0038
ONL
TAGGCCACAG
1.9
0.0019
ONL
TTTTTTTTTG
(
8
)
1.9
0.0019
