Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.18946	Ap2m1	adaptor protein complex AP-2, mu1	16		11773
Gene Ontology	clathrin vesicle coat | coated pit | intracellular protein transport | lipid binding | mitochondrion | secretory granule | transport | transport vesicle | vesicle-mediated transport | vesicle-mediated transport
Human Homolog	AP2M1[adaptor-related protein complex 2, mu 1 subunit]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 142 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAAAAAAA (658) 203.9 0.2039 P8 Cb GC CCAAAAAAAA (35) 22.8 0.0228 P8 Cb GC CAGTTCTGGC (2) 6.5 0.0065 P8 Cb GC CCAGAAAAAA (8) 4.9 0.0049 P8 Cb GC GTCTTCGAAT (2) 4.9 0.0049 P8 Cb GC TTTTTTTTTT (433) 4.9 0.0049 P8 Cb GC AAGGGGAAGG (6) 1.6 0.0016 P8 Cb GC CCTGGAGTGG (3) 1.6 0.0016 P8 Cb GC GTGGTGTACA (3) 1.6 0.0016 Cb medulloblastoma AAAAAAAAAA (658) 797.8 0.7978 Cb medulloblastoma CCAAAAAAAA (35) 90.2 0.0902 Cb medulloblastoma CAGTTCTGGC (2) 6.9 0.0069 Cb medulloblastoma CCAGAAAAAA (8) 2.3 0.0023 Cb medulloblastoma TTTTTTTTTT (433) 2.3 0.0023 P8 GC+1d culture AAAAAAAAAA (658) 204.3 0.2043 P8 GC+1d culture CCAAAAAAAA (35) 38.8 0.0388 P8 GC+1d culture ATGTCATCAA (4) 13.7 0.0137 P8 GC+1d culture TTTTTTTTTT (433) 13.7 0.0137 P8 GC+1d culture CAGTTCTGGC (2) 12.6 0.0126 P8 GC+1d culture CCAGAAAAAA (8) 2.3 0.0023 P8 GC+1d culture AAGGGGAAGG (6) 1.1 0.0011 P8 GC+SHH+1d culture AAAAAAAAAA (658) 278.7 0.2787 P8 GC+SHH+1d culture CCAAAAAAAA (35) 39.8 0.0398 P8 GC+SHH+1d culture ATGTCATCAA (4) 12.9 0.0129 P8 GC+SHH+1d culture CAGTTCTGGC (2) 8.2 0.0082 P8 GC+SHH+1d culture TTTTTTTTTT (433) 5.9 0.0059 P8 GC+SHH+1d culture AAGGGGAAGG (6) 1.2 0.0012 P8 GC+SHH+1d culture CCAGAAAAAA (8) 1.2 0.0012 P8 GC+SHH+1d culture CCTTGAGTGC 1.2 0.0012 P8 GC+SHH+1d culture GTGCACACAG (4) 1.2 0.0012 3T3 fibroblasts AAAAAAAAAA (658) 28 0.028 3T3 fibroblasts CAGTTCTGGC (2) 3.5 0.0035 E15 cortex AAAAAAAAAA (658) 212.8 0.2128 E15 cortex ATGTCATCAA (4) 9.9 0.0099 E15 cortex CAGTTCTGGC (2) 9.9 0.0099 E15 cortex CCAAAAAAAA (35) 9.9 0.0099 E15 cortex CCAGAAAAAA (8) 4.9 0.0049 E15 cortex TTTTTTTTTT (433) 4.9 0.0049 P1 cortex AAAAAAAAAA (658) 245.4 0.2454 P1 cortex CCAAAAAAAA (35) 40.9 0.0409 P1 cortex ATGTCATCAA (4) 9.1 0.0091 P1 cortex CCAGAAAAAA (8) 4.5 0.0045 P1 cortex CCAGACAAAA 4.5 0.0045 P1 cortex TTTTTTTTTT (433) 4.5 0.0045 Hypothalamus AAAAAAAAAA (658) 123.2 0.1232 Hypothalamus CCAAAAAAAA (35) 38 0.038 Hypothalamus TGTCAGGCTG (2) 7.2 0.0072 Hypothalamus TTTTTTTTTT (433) 7.2 0.0072 Hypothalamus ATGTCATCAA (4) 3.6 0.0036 Hypothalamus CAGTTCTGGC (2) 3.6 0.0036 Hypothalamus AAGGGGAAGG (6) 1.8 0.0018 E12.5 retina AAAAAAAAAA (658) 138.9 0.1389 E12.5 retina CCAAAAAAAA (35) 16.9 0.0169 E12.5 retina ATGTCATCAA (4) 11.3 0.0113 E12.5 retina TTTTTTTTTT (433) 7.5 0.0075 E12.5 retina CCTTGAGTGC 5.6 0.0056 E12.5 retina CAGTTCTGGC (2) 3.8 0.0038 E12.5 retina GAAGAGGAAA (4) 1.9 0.0019 E12.5 retina GTGCACACAG (4) 1.9 0.0019 E14.5 retina AAAAAAAAAA (658) 94.7 0.0947 E14.5 retina TTTTTTTTTT (433) 23.7 0.0237 E14.5 retina CCAAAAAAAA (35) 18.2 0.0182 E14.5 retina CAGTTCTGGC (2) 9.1 0.0091 E14.5 retina ATGTCATCAA (4) 7.3 0.0073 E14.5 retina TGTCAGGCTG (2) 3.6 0.0036 E14.5 retina CCAGAAAAAA (8) 1.8 0.0018 E14.5 retina GAAGAGGAAA (4) 1.8 0.0018 E14.5 retina GTGCACACAG (4) 1.8 0.0018 E16.5 retina AAAAAAAAAA (658) 43.5 0.0435 E16.5 retina CCAAAAAAAA (35) 16.3 0.0163 E16.5 retina ATGTCATCAA (4) 10.9 0.0109 E16.5 retina CCTGAGTGCA (3) 5.4 0.0054 E16.5 retina TTTTTTTTTT (433) 5.4 0.0054 E16.5 retina CAGTTCTGGC (2) 3.6 0.0036 E16.5 retina TGTCAGGCTG (2) 3.6 0.0036 E18.5 retina AAAAAAAAAA (658) 374.7 0.3747 E18.5 retina CCAAAAAAAA (35) 38.2 0.0382 E18.5 retina TTTTTTTTTT (433) 10.9 0.0109 E18.5 retina ATGTCATCAA (4) 7.3 0.0073 E18.5 retina CCAGAAAAAA (8) 3.6 0.0036 E18.5 retina GTGCACACAG (4) 3.6 0.0036 E18.5 retina GTGGTGTACA (3) 3.6 0.0036 E18.5 retina CAGTTCTGGC (2) 1.8 0.0018 E18.5 retina GGGGGGGCAC (2) 1.8 0.0018 P0.5 retina AAAAAAAAAA (658) 117.8 0.1178 P0.5 retina CCAAAAAAAA (35) 29.4 0.0294 P0.5 retina TTTTTTTTTT (433) 9.8 0.0098 P0.5 retina ATGTCATCAA (4) 7.9 0.0079 P0.5 retina CAGTTCTGGC (2) 5.9 0.0059 P0.5 retina CCTTGAGTGC 2 0.002 P2.5 retina AAAAAAAAAA (658) 329.1 0.3291 P2.5 retina CCAAAAAAAA (35) 44 0.044 P2.5 retina CAGTTCTGGC (2) 8.8 0.0088 P2.5 retina TTTTTTTTTT (433) 7 0.007 P2.5 retina CCAGAAAAAA (8) 1.8 0.0018 P2.5 retina CCTTGAGTGC 1.8 0.0018 P2.5 retina GTGGTGTACA (3) 1.8 0.0018 P4.5 retina AAAAAAAAAA (658) 283.3 0.2833 P4.5 retina CCAAAAAAAA (35) 39.6 0.0396 P4.5 retina TTTTTTTTTT (433) 9.9 0.0099 P4.5 retina CAGTTCTGGC (2) 7.9 0.0079 P4.5 retina ATGTCATCAA (4) 2 0.002 P4.5 retina GTGGTGTACA (3) 2 0.002 P6.5 retina AAAAAAAAAA (658) 266.8 0.2668 P6.5 retina CCAAAAAAAA (35) 38.3 0.0383 P6.5 retina CAGTTCTGGC (2) 11.7 0.0117 P6.5 retina TTTTTTTTTT (433) 8.3 0.0083 P6.5 retina ATGTCATCAA (4) 5 0.005 P6.5 retina CCAGAAAAAA (8) 1.7 0.0017 P6.5 retina CCTTGAGTGC 1.7 0.0017 P6.5 retina GAAGAGGAAA (4) 1.7 0.0017 P6.5 retina GGGGGGGCAC (2) 1.7 0.0017 P6.5 retina GTGCACACAG (4) 1.7 0.0017 P10.5 crx- retina AAAAAAAAAA (658) 44.6 0.0446 P10.5 crx- retina CAGTTCTGGC (2) 14.9 0.0149 P10.5 crx- retina CCAAAAAAAA (35) 14.9 0.0149 P10.5 crx- retina ATGTCATCAA (4) 5.6 0.0056 P10.5 crx- retina CCAGAAAAAA (8) 1.9 0.0019 P10.5 crx- retina CCTGGAGTGG (3) 1.9 0.0019 P10.5 crx- retina CCTTGAGTGC 1.9 0.0019 P10.5 crx+ retina AAAAAAAAAA (658) 96.1 0.0961 P10.5 crx+ retina CCAAAAAAAA (35) 38.4 0.0384 P10.5 crx+ retina CAGTTCTGGC (2) 28.8 0.0288 P10.5 crx+ retina TTTTTTTTTT (433) 3.8 0.0038 P10.5 crx+ retina CCAGAAAAAA (8) 1.9 0.0019 P10.5 crx+ retina CCTGAGTGCA (3) 1.9 0.0019 Adult retinal AAAAAAAAAA (658) 57.4 0.0574 Adult retinal CCAAAAAAAA (35) 35.2 0.0352 Adult retinal ATGTCATCAA (4) 14.8 0.0148 Adult retinal TTTTTTTTTT (433) 7.4 0.0074 Adult retinal CAGTTCTGGC (2) 1.9 0.0019 Adult retinal CCAGAAAAAA (8) 1.9 0.0019 Adult retinal CCTGGAGTGG (3) 1.9 0.0019 Adult retinal GGGGGGGCAC (2) 1.9 0.0019 Adult retinal GTCTTCGAAT (2) 1.9 0.0019 ONL AAAAAAAAAA (658) 103.4 0.1034 ONL ATGTCATCAA (4) 9.6 0.0096 ONL CCAAAAAAAA (35) 7.7 0.0077 ONL TTTTTTTTTT (433) 3.8 0.0038 ONL CAGTTCTGGC (2) 1.9 0.0019 ONL CCAGACAAAA 1.9 0.0019 ONL TGTCAGGCTG (2) 1.9 0.0019