Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.19131	C3	complement component 3	17	17 34.3 cM	12266
Gene Ontology	complement activation | complement activation, alternative pathway | complement activation, classical pathway | endopeptidase inhibitor activity | extracellular | extracellular space | inflammatory response | positive regulation of phagocytosis | protein binding
Human Homolog	C3[complement component 3]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 59 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  Cb medulloblastoma GGGCAGGGGA (5) 9.2 0.0092 P8 GC+1d culture TGGGGCCTCT 8 0.008 P8 GC+1d culture TATTCAATCA (4) 2.3 0.0023 P8 GC+1d culture CAAACTCAAA 1.1 0.0011 P8 GC+1d culture CCCAACTCAA (2) 1.1 0.0011 P8 GC+1d culture GGGCAGGGGA (5) 1.1 0.0011 P8 GC+SHH+1d culture TGGGGCCTCT 5.9 0.0059 P8 GC+SHH+1d culture AGCAAAGATA (4) 1.2 0.0012 P8 GC+SHH+1d culture AGGAGAGGTG (3) 1.2 0.0012 P8 GC+SHH+1d culture TGCTGGGGTA 1.2 0.0012 3T3 fibroblasts GTATTCCAAG (4) 3.5 0.0035 3T3 fibroblasts TGGGGCCTCT 3.5 0.0035 P1 cortex AGCAAAGATA (4) 9.1 0.0091 Hypothalamus GGGCAGGGGA (5) 30.8 0.0308 Hypothalamus TTACAGGAAT (3) 1.8 0.0018 E12.5 retina AGGAGAGGTG (3) 1.9 0.0019 E12.5 retina CAAACTCAAA 1.9 0.0019 E14.5 retina ATTCTCAGGT (2) 3.6 0.0036 E14.5 retina TATTCAATCA (4) 3.6 0.0036 E14.5 retina CAAACTCAAA 1.8 0.0018 E14.5 retina CCCAACTCAA (2) 1.8 0.0018 E14.5 retina GGGCAGGGGA (5) 1.8 0.0018 E16.5 retina ATTCTCAGGT (2) 7.2 0.0072 E16.5 retina CCCAACTCAA (2) 3.6 0.0036 E16.5 retina AGCAAAGATA (4) 1.8 0.0018 E16.5 retina GGGCAGGGGA (5) 1.8 0.0018 E18.5 retina AGGAGAGGTG (3) 3.6 0.0036 E18.5 retina GGGCAGGGGA (5) 3.6 0.0036 E18.5 retina CCCAACTCAA (2) 1.8 0.0018 E18.5 retina GTATTCCAAG (4) 1.8 0.0018 E18.5 retina TATTCAATCA (4) 1.8 0.0018 P0.5 retina AGCAAAGATA (4) 2 0.002 P0.5 retina CCCAACTCAA (2) 2 0.002 P2.5 retina GGGCAGGGGA (5) 5.3 0.0053 P2.5 retina CCCAACTCAA (2) 3.5 0.0035 P2.5 retina TTACAGGAAT (3) 3.5 0.0035 P2.5 retina AGCAAAGATA (4) 1.8 0.0018 P2.5 retina TATTCAATCA (4) 1.8 0.0018 P2.5 retina TGCTGGGGTA 1.8 0.0018 P4.5 retina AGGAGAGGTG (3) 4 0.004 P4.5 retina GGGCAGGGGA (5) 4 0.004 P4.5 retina CAAACTCAAA 2 0.002 P6.5 retina GGGCAGGGGA (5) 5 0.005 P6.5 retina AGGAGAGGTG (3) 1.7 0.0017 P6.5 retina GTATTCCAAG (4) 1.7 0.0017 P10.5 crx- retina TATTCAATCA (4) 5.6 0.0056 P10.5 crx- retina CCCAACTCAA (2) 3.7 0.0037 P10.5 crx- retina AGCAAAGATA (4) 1.9 0.0019 P10.5 crx- retina CAAACTCAAA 1.9 0.0019 P10.5 crx- retina GGGCAGGGGA (5) 1.9 0.0019 P10.5 crx- retina GTATTCCAAG (4) 1.9 0.0019 P10.5 crx+ retina CCCAACTCAA (2) 5.8 0.0058 P10.5 crx+ retina AGCAAAGATA (4) 1.9 0.0019 P10.5 crx+ retina GGGCAGGGGA (5) 1.9 0.0019 Adult retinal CCCAACTCAA (2) 14.8 0.0148 Adult retinal GGGCAGGGGA (5) 7.4 0.0074 Adult retinal AGGAGAGGTG (3) 5.6 0.0056 ONL CCCAACTCAA (2) 11.5 0.0115 ONL AGGAGAGGTG (3) 3.8 0.0038