Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.19142	Capza1	capping protein (actin filament) muscle Z-line, alpha 1	3	3 55.0 cM	12340
Gene Ontology	actin binding | actin cytoskeleton organization and biogenesis | F-actin capping protein complex
Human Homolog	CAPZA1[capping protein (actin filament) muscle Z-line, alpha 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 105 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCACACTGTC CCACACTGTT CCTTTAATCC (3) GAAAGAAAGG (2) GATGGATAGT TGTAACTGTG TTTAACTATA 79.8 0.0798 Cb medulloblastoma CCACACTGTC CCTTTAATCC (3) TTTAACTATA 53.1 0.0531 P8 GC+1d culture CCACACTGTC CCTTTAATCC (3) GAAAGAAAGG (2) GAATACTGTT GATGGATAGT TCTTTAATCC (2) TGTAACTGTG TTTAACTATA 58.2 0.0582 P8 GC+SHH+1d culture CCACACTGTC CCTTTAATCC (3) GAAAGAAAAG (2) GAAAGAAAGG (2) GAATACTGTT TCTTTAATCC (2) TGTAACTGTG TTTAACTATA 59.8 0.0598 3T3 fibroblasts CCACACTGTC CCTTTAATCC (3) TCTTTAATCC (2) 94.6 0.0946 E15 cortex CCACACTGTC CCTTTAATCC (3) TCTTTAATCC (2) 69.2 0.0692 P1 cortex CCTTTAATCC (3) GAAAGAAAGG (2) TCTTTAATCC (2) TTTAACTATA 181.7 0.1817 Hypothalamus CCACACTGTC CCACACTGTT CCTTTAATCC (3) GATGGATAGT TTTAACTATA 36.2 0.0362 E12.5 retina CCACACTGTC CCTTTAATCC (3) TGTAACTGTG 95.8 0.0958 E14.5 retina CCACACTGTC CCTTTAATCC (3) TCTTTAATCC (2) TGTAACTGTG TTGGGAGGCA 162.3 0.1623 E16.5 retina AGTTCTAGGC CCACACTGTC CCACACTGTT CCTTTAATCC (3) TCTTTAATCC (2) TTCTGAGCAA (2) 94.2 0.0942 E18.5 retina CCACACTGTC CCTTTAATCC (3) TCTTTAATCC (2) 43.6 0.0436 P0.5 retina AGTTCTAGGC CCACACTGTC CCACACTGTT CCTTTAATCC (3) GAATACTGTT TCTTTAATCC (2) TTGGGAGGCA TTTAACTATA 86.6 0.0866 P2.5 retina CCACACTGTC CCTTTAATCC (3) TCTTTAATCC (2) TTGGGAGGCA 86.3 0.0863 P4.5 retina CCACACTGTC CCTTTAATCC (3) GAAAGAAAGG (2) GATGGATAGT TCTTTAATCC (2) TTTAACTATA 69.4 0.0694 P6.5 retina CCACACTGTC CCTTTAATCC (3) GATGGATAGT TTTAACTATA 86.7 0.0867 P10.5 crx- retina CCACACTGTC CCTTTAATCC (3) GATGGATAGT TCTTTAATCC (2) TGTAACTGTG TTCTGAGCAA (2) TTTAACTATA 87.6 0.0876 P10.5 crx+ retina AGTTCTAGGC CCACACTGTC CCTTTAATCC (3) GATGGATAGT TCTTTAATCC (2) TTTAACTATA 59.4 0.0594 Adult retinal CCACACTGTC CCTTTAATCC (3) GAATACTGTT TCTTTAATCC (2) 150 0.15 ONL AGTTCTAGGC CCACACTGTC CCTTTAATCC (3) GAAAGAAAAG (2) TCTTTAATCC (2) TTCTGAGCAA (2) TTGGGAGGCA TTTAACTATA 118.7 0.1187