Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.191892	Nap1l5	nucleosome assembly protein 1-like 5	6		58243
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 68 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATTGATTAAT (5) 11.4 0.0114 Cb medulloblastoma TGTATCCAGT 13.9 0.0139 Cb medulloblastoma ATTGATTAAT (5) 4.6 0.0046 Cb medulloblastoma GAGCAAGCCT 4.6 0.0046 Cb medulloblastoma GCCGACCCCG (2) 2.3 0.0023 P8 GC+1d culture ATTGATTAAT (5) 6.8 0.0068 P8 GC+1d culture AGAGGGAAGG (6) 2.3 0.0023 P8 GC+1d culture GGAAGTGAAA 2.3 0.0023 P8 GC+1d culture GTGAAGAAAC (6) 2.3 0.0023 P8 GC+1d culture TTCTGTAAAG (5) 2.3 0.0023 P8 GC+1d culture TAATTCTAAT (6) 1.1 0.0011 P8 GC+1d culture TCTGTTTATT (2) 1.1 0.0011 P8 GC+SHH+1d culture ATTGATTAAT (5) 10.5 0.0105 P8 GC+SHH+1d culture TGTATCCAGT 1.2 0.0012 E15 cortex AAAATTAGTA 4.9 0.0049 P1 cortex TGTATCCAGT 13.6 0.0136 Hypothalamus TGTATCCAGT 34.4 0.0344 Hypothalamus ATTGATTAAT (5) 5.4 0.0054 Hypothalamus TATGTATGTA (15) 5.4 0.0054 Hypothalamus TCACTTTTGA (2) 3.6 0.0036 Hypothalamus GCCGACCCCG (2) 1.8 0.0018 Hypothalamus TAATTCTAAT (6) 1.8 0.0018 E12.5 retina AGAGGGAAGG (6) 1.9 0.0019 E12.5 retina ATTGATTAAT (5) 1.9 0.0019 E12.5 retina TATGTATGTA (15) 1.9 0.0019 E14.5 retina TATGTATGTA (15) 1.8 0.0018 E16.5 retina ATTGATTAAT (5) 5.4 0.0054 E16.5 retina AGAGGGAAGG (6) 1.8 0.0018 E16.5 retina TAATTCTAAT (6) 1.8 0.0018 E16.5 retina TATGTATGTA (15) 1.8 0.0018 E18.5 retina ATTGATTAAT (5) 10.9 0.0109 E18.5 retina TATGTATGTA (15) 1.8 0.0018 P0.5 retina ATTGATTAAT (5) 3.9 0.0039 P0.5 retina TCACTTTTGA (2) 2 0.002 P0.5 retina TTCTGTAAAG (5) 2 0.002 P2.5 retina ATTGATTAAT (5) 3.5 0.0035 P2.5 retina AGAGGGAAGG (6) 1.8 0.0018 P2.5 retina TGTATCCAGT 1.8 0.0018 P4.5 retina ATTGATTAAT (5) 5.9 0.0059 P4.5 retina GCCGACCCCG (2) 2 0.002 P4.5 retina TATGTATGTA (15) 2 0.002 P6.5 retina ATTGATTAAT (5) 5 0.005 P6.5 retina AAAATTAGTA 1.7 0.0017 P6.5 retina AGAGGGAAGG (6) 1.7 0.0017 P6.5 retina GCCGACCCCG (2) 1.7 0.0017 P6.5 retina GTGAAGAAAC (6) 1.7 0.0017 P6.5 retina TGTATCCAGT 1.7 0.0017 P6.5 retina TTCTGTAAAG (5) 1.7 0.0017 P10.5 crx- retina TGTATCCAGT 5.6 0.0056 P10.5 crx- retina GCCGACCCCG (2) 1.9 0.0019 P10.5 crx- retina TTCTGTAAAG (5) 1.9 0.0019 P10.5 crx+ retina TCTGTTTATT (2) 3.8 0.0038 P10.5 crx+ retina TGTATCCAGT 3.8 0.0038 P10.5 crx+ retina AAAATTAGTA 1.9 0.0019 P10.5 crx+ retina ATTGATTAAT (5) 1.9 0.0019 P10.5 crx+ retina TAATTCTAAT (6) 1.9 0.0019 P10.5 crx+ retina TATGTATGTA (15) 1.9 0.0019 P10.5 crx+ retina TCACTTTTGA (2) 1.9 0.0019 Adult retinal TGTATCCAGT 14.8 0.0148 Adult retinal GTGAAGAAAC (6) 3.7 0.0037 Adult retinal TAATTCTAAT (6) 1.9 0.0019 ONL GAGCAAGCCT 1.9 0.0019 ONL GGAAGTGAAA 1.9 0.0019 ONL GTGAAGAAAC (6) 1.9 0.0019 ONL TAATTCTAAT (6) 1.9 0.0019 ONL TATGTATGTA (15) 1.9 0.0019 ONL TCTGTTTATT (2) 1.9 0.0019 ONL TGTATCCAGT 1.9 0.0019